Analysis of interatomic Contacts of Structural Units in PDB entry:
6ERY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ERY entry

There are 2 chains in PDB entry 6ERY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 GLY 359LYS 596
A
 MET 361ARG 594
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 6ERY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
379 393Right-handed alpha
Helix 2
AA2
B
431 443Right-handed alpha
Helix 3
AA3
B
456 461Right-handed alpha
Helix 4
AA4
B
464 475Right-handed alpha
Helix 5
AA5
B
477 479Right-handed 310
Helix 6
AA6
B
480 501Right-handed alpha
Helix 7
AA7
B
529 551Right-handed alpha
Helix 8
AA8
B
558 570Right-handed alpha
Helix 9
AA9
B
571 576Right-handed alpha
Helix 10
AB1
B
580 588Right-handed alpha
Helix 11
AB2
B
589 593Right-handed 310
Helix 12
AB3
A
379 393Right-handed alpha
Helix 13
AB4
A
431 443Right-handed alpha
Helix 14
AB5
A
456 461Right-handed alpha
Helix 15
AB6
A
464 475Right-handed alpha
Helix 16
AB7
A
477 501Right-handed alpha
Helix 17
AB8
A
503 509Right-handed alpha
Helix 18
AB9
A
511 515Right-handed 310
Helix 19
AC1
A
529 551Right-handed alpha
Helix 20
AC2
A
558 569Right-handed alpha
Helix 21
AC3
A
571 576Right-handed alpha
Helix 22
AC4
A
580 588Right-handed alpha
Helix 23
AC5
A
589 593Right-handed 310
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There are 2 sheets in PDB entry 6ERY. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
396 401first strand
Strand 2
B
363 368parallel
Strand 3
B
421 424anti-parallel
Strand 4
B
427 429anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
397 401first strand
Strand 2
A
363 368parallel
Strand 3
A
421 424anti-parallel
Strand 4
A
427 429anti-parallel
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