Analysis of interatomic Contacts of Structural Units in PDB entry:
6ES9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ES9 entry

There are 2 chains in PDB entry 6ES9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 7ASP 551
B
 MET 7ASP 551
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 53 helices in PDB entry 6ES9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 42Right-handed alpha
Helix 2
AA2
A
48 55Right-handed alpha
Helix 3
AA3
A
55 85Right-handed alpha
Helix 4
AA4
A
89 110Right-handed alpha
Helix 5
AA5
A
120 125Right-handed 310
Helix 6
AA6
A
131 139Right-handed alpha
Helix 7
AA7
A
142 154Right-handed alpha
Helix 8
AA8
A
168 186Right-handed alpha
Helix 9
AA9
A
189 196Right-handed alpha
Helix 10
AB1
A
201 211Right-handed alpha
Helix 11
AB2
A
212 216Right-handed 310
Helix 12
AB3
A
219 223Right-handed 310
Helix 13
AB4
A
228 243Right-handed alpha
Helix 14
AB5
A
243 264Right-handed alpha
Helix 15
AB6
A
265 278Right-handed alpha
Helix 16
AB7
A
295 299Right-handed 310
Helix 17
AB8
A
340 342Right-handed 310
Helix 18
AB9
A
391 395Right-handed 310
Helix 19
AC1
A
402 409Right-handed alpha
Helix 20
AC2
A
410 440Right-handed alpha
Helix 21
AC3
A
450 480Right-handed alpha
Helix 22
AC4
A
484 511Right-handed alpha
Helix 23
AC5
A
512 516Right-handed 310
Helix 24
AC6
A
519 530Right-handed alpha
Helix 25
AC7
A
531 533Right-handed 310
Helix 26
AC8
A
537 551Right-handed alpha
Helix 27
AC9
B
7 10Right-handed 310
Helix 28
AD1
B
11 42Right-handed alpha
Helix 29
AD2
B
48 55Right-handed alpha
Helix 30
AD3
B
55 85Right-handed alpha
Helix 31
AD4
B
89 110Right-handed alpha
Helix 32
AD5
B
120 125Right-handed 310
Helix 33
AD6
B
131 138Right-handed alpha
Helix 34
AD7
B
142 155Right-handed alpha
Helix 35
AD8
B
168 186Right-handed alpha
Helix 36
AD9
B
189 196Right-handed alpha
Helix 37
AE1
B
201 211Right-handed alpha
Helix 38
AE2
B
212 216Right-handed 310
Helix 39
AE3
B
219 223Right-handed 310
Helix 40
AE4
B
228 243Right-handed alpha
Helix 41
AE5
B
243 264Right-handed alpha
Helix 42
AE6
B
265 278Right-handed alpha
Helix 43
AE7
B
295 299Right-handed 310
Helix 44
AE8
B
340 342Right-handed 310
Helix 45
AE9
B
391 395Right-handed 310
Helix 46
AF1
B
402 409Right-handed alpha
Helix 47
AF2
B
410 440Right-handed alpha
Helix 48
AF3
B
450 480Right-handed alpha
Helix 49
AF4
B
484 511Right-handed alpha
Helix 50
AF5
B
512 516Right-handed 310
Helix 51
AF6
B
519 530Right-handed alpha
Helix 52
AF7
B
531 533Right-handed 310
Helix 53
AF8
B
537 551Right-handed alpha
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There are 8 sheets in PDB entry 6ES9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 112first strand
Strand 2
A
118 119anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
283 286first strand
Strand 2
A
327 333parallel
Strand 3
A
344 350anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
302 306first strand
Strand 2
A
309 320anti-parallel
Strand 3
A
380 390anti-parallel
Strand 4
A
365 369anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
441 442first strand
Strand 2
A
445 446anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
111 112first strand
Strand 2
B
118 119anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
283 286first strand
Strand 2
B
327 333parallel
Strand 3
B
344 350anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
302 306first strand
Strand 2
B
309 320anti-parallel
Strand 3
B
380 390anti-parallel
Strand 4
B
365 369anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
441 442first strand
Strand 2
B
445 446anti-parallel
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