Analysis of interatomic Contacts of Structural Units in PDB entry:
6ESB

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ESB entry

There are 7 chains in PDB entry 6ESB (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
1	PRO 14	MET 360
2	PRO 14	LYS 359
3	LYS 16	THR 358
4	PRO 17	PHE 334
5	VAL 23	MET 360
6	LYS 15	LYS 359
7	THR 288	TYR 301

There are 35 helices in PDB entry 6ESB. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	1	31	37	Right-handed 310
Helix 2	AA2	1	81	85	Right-handed 310
Helix 3	AA3	1	121	127	Right-handed 310
Helix 4	AA4	1	183	187	Right-handed 310
Helix 5	AA5	2	31	37	Right-handed 310
Helix 6	AA6	2	81	85	Right-handed 310
Helix 7	AA7	2	121	127	Right-handed 310
Helix 8	AA8	2	183	188	Right-handed 310
Helix 9	AA9	2	190	192	Right-handed 310
Helix 10	AB1	2	300	302	Right-handed 310
Helix 11	AB2	2	303	310	Right-handed alpha
Helix 12	AB3	3	31	35	Right-handed 310
Helix 13	AB4	3	81	85	Right-handed 310
Helix 14	AB5	3	121	127	Right-handed 310
Helix 15	AB6	3	183	188	Right-handed 310
Helix 16	AB7	3	300	312	Right-handed alpha
Helix 17	AB8	4	31	37	Right-handed 310
Helix 18	AB9	4	81	85	Right-handed 310
Helix 19	AC1	4	121	127	Right-handed 310
Helix 20	AC2	4	183	188	Right-handed 310
Helix 21	AC3	4	300	313	Right-handed alpha
Helix 22	AC4	5	31	35	Right-handed 310
Helix 23	AC5	5	59	63	Right-handed 310
Helix 24	AC6	5	81	85	Right-handed 310
Helix 25	AC7	5	121	127	Right-handed 310
Helix 26	AC8	5	183	188	Right-handed 310
Helix 27	AC9	5	204	208	Right-handed 310
Helix 28	AD1	5	300	313	Right-handed alpha
Helix 29	AD2	6	31	35	Right-handed 310
Helix 30	AD3	6	74	78	Right-handed 310
Helix 31	AD4	6	81	85	Right-handed 310
Helix 32	AD5	6	121	127	Right-handed 310
Helix 33	AD6	6	183	188	Right-handed 310
Helix 34	AD7	6	300	311	Right-handed alpha
Helix 35	AD8	7	293	299	Right-handed alpha

There are 33 sheets in PDB entry 6ESB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	1	46	51	first strand
Strand 2	1	283	295	anti-parallel
Strand 3	1	118	120	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	1	46	51	first strand
Strand 2	1	283	295	anti-parallel
Strand 3	1	107	115	anti-parallel
Strand 4	1	242	243	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	1	89	93	first strand
Strand 2	1	259	266	anti-parallel
Strand 3	1	148	155	anti-parallel
Strand 4	1	218	225	anti-parallel
Strand 5	5	233	237	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	1	194	196	first strand
Strand 2	1	160	163	anti-parallel
Strand 3	1	208	210	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	1	233	237	first strand
Strand 2	2	218	225	anti-parallel
Strand 3	2	148	155	anti-parallel
Strand 4	2	258	271	anti-parallel
Strand 5	2	89	94	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	1	233	237	first strand
Strand 2	2	218	225	anti-parallel
Strand 3	2	148	155	anti-parallel
Strand 4	2	258	271	anti-parallel
Strand 5	2	277	281	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	1	268	271	first strand
Strand 2	1	277	280	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	1	347	350	first strand
Strand 2	1	355	358	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	22	26	first strand
Strand 2	6	328	339	anti-parallel
Strand 3	2	44	51	anti-parallel
Strand 4	2	283	296	anti-parallel
Strand 5	2	118	120	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	22	26	first strand
Strand 2	6	328	339	anti-parallel
Strand 3	2	44	51	anti-parallel
Strand 4	2	283	296	anti-parallel
Strand 5	2	106	115	anti-parallel
Strand 6	2	242	243	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	194	195	first strand
Strand 2	2	161	163	anti-parallel
Strand 3	2	208	210	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	233	237	first strand
Strand 2	3	218	225	anti-parallel
Strand 3	3	148	155	anti-parallel
Strand 4	3	258	266	anti-parallel
Strand 5	3	89	94	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	347	350	first strand
Strand 2	2	355	358	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	44	51	first strand
Strand 2	3	283	293	anti-parallel
Strand 3	3	118	120	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	44	51	first strand
Strand 2	3	283	293	anti-parallel
Strand 3	3	109	115	anti-parallel
Strand 4	3	242	243	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	194	195	first strand
Strand 2	3	161	163	anti-parallel
Strand 3	3	208	210	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	233	237	first strand
Strand 2	4	218	225	anti-parallel
Strand 3	4	148	155	anti-parallel
Strand 4	4	258	271	anti-parallel
Strand 5	4	89	94	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	233	237	first strand
Strand 2	4	218	225	anti-parallel
Strand 3	4	148	155	anti-parallel
Strand 4	4	258	271	anti-parallel
Strand 5	4	277	281	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	268	271	first strand
Strand 2	3	277	280	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	45	51	first strand
Strand 2	4	283	295	anti-parallel
Strand 3	4	107	115	anti-parallel
Strand 4	4	242	243	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	118	120	first strand
Strand 2	4	283	295	anti-parallel
Strand 3	4	107	115	anti-parallel
Strand 4	4	253	254	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	194	196	first strand
Strand 2	4	160	163	anti-parallel
Strand 3	4	208	210	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	233	237	first strand
Strand 2	5	218	225	anti-parallel
Strand 3	5	148	155	anti-parallel
Strand 4	5	259	266	anti-parallel
Strand 5	5	89	93	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	45	51	first strand
Strand 2	5	283	293	anti-parallel
Strand 3	5	109	115	anti-parallel
Strand 4	5	242	243	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	118	120	first strand
Strand 2	5	283	293	anti-parallel
Strand 3	5	109	115	anti-parallel
Strand 4	5	253	254	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	194	195	first strand
Strand 2	5	161	162	anti-parallel
Strand 3	5	209	210	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	268	271	first strand
Strand 2	5	277	280	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	346	350	first strand
Strand 2	5	355	359	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	44	51	first strand
Strand 2	6	284	295	anti-parallel
Strand 3	6	107	115	anti-parallel
Strand 4	6	253	254	anti-parallel

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There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	118	119	first strand
Strand 2	6	284	295	anti-parallel
Strand 3	6	107	115	anti-parallel
Strand 4	6	240	243	anti-parallel
Strand 5	7	289	290	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	89	94	first strand
Strand 2	6	258	271	anti-parallel
Strand 3	6	149	155	anti-parallel
Strand 4	6	218	223	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	89	94	first strand
Strand 2	6	258	271	anti-parallel
Strand 3	6	277	281	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	194	196	first strand
Strand 2	6	160	163	anti-parallel
Strand 3	6	208	210	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ESB

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ESB