Analysis of interatomic Contacts of Structural Units in PDB entry:
6ESJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ESJ entry

There are 2 chains in PDB entry 6ESJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 3VAL 529
B
 ILE 4VAL 529
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 6ESJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
76 82Right-handed alpha
Helix 2
AA2
A
130 137Right-handed alpha
Helix 3
AA3
A
149 154Right-handed alpha
Helix 4
AA4
A
165 182Right-handed alpha
Helix 5
AA5
A
199 208Right-handed alpha
Helix 6
AA6
A
209 214Right-handed 310
Helix 7
AA7
A
235 240Right-handed alpha
Helix 8
AA8
A
240 250Right-handed alpha
Helix 9
AA9
A
260 267Right-handed alpha
Helix 10
AB1
A
268 274Right-handed alpha
Helix 11
AB2
A
302 309Right-handed alpha
Helix 12
AB3
A
324 330Right-handed 310
Helix 13
AB4
A
346 356Right-handed alpha
Helix 14
AB5
A
362 373Right-handed alpha
Helix 15
AB6
A
383 398Right-handed alpha
Helix 16
AB7
A
398 411Right-handed alpha
Helix 17
AB8
A
431 435Right-handed 310
Helix 18
AB9
A
441 446Right-handed alpha
Helix 19
AC1
A
457 478Right-handed alpha
Helix 20
AC2
A
515 525Right-handed alpha
Helix 21
AC3
A
526 529Right-handed 310
Helix 22
AC4
B
38 42Right-handed 310
Helix 23
AC5
B
76 81Right-handed alpha
Helix 24
AC6
B
125 129Right-handed 310
Helix 25
AC7
B
132 138Right-handed alpha
Helix 26
AC8
B
149 154Right-handed alpha
Helix 27
AC9
B
165 180Right-handed alpha
Helix 28
AD1
B
181 186Right-handed alpha
Helix 29
AD2
B
199 208Right-handed alpha
Helix 30
AD3
B
210 214Right-handed 310
Helix 31
AD4
B
235 250Right-handed alpha
Helix 32
AD5
B
256 267Right-handed alpha
Helix 33
AD6
B
268 274Right-handed alpha
Helix 34
AD7
B
302 310Right-handed alpha
Helix 35
AD8
B
324 330Right-handed 310
Helix 36
AD9
B
346 358Right-handed alpha
Helix 37
AE1
B
362 373Right-handed alpha
Helix 38
AE2
B
383 396Right-handed alpha
Helix 39
AE3
B
398 411Right-handed alpha
Helix 40
AE4
B
431 435Right-handed 310
Helix 41
AE5
B
441 446Right-handed alpha
Helix 42
AE6
B
447 451Right-handed 310
Helix 43
AE7
B
457 478Right-handed alpha
Helix 44
AE8
B
515 525Right-handed alpha
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There are 4 sheets in PDB entry 6ESJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 7first strand
Strand 2
A
12 14anti-parallel
Strand 3
A
56 57parallel
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There are 11 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 18first strand
Strand 2
A
25 32anti-parallel
Strand 3
A
94 100anti-parallel
Strand 4
A
140 144anti-parallel
Strand 5
A
107 113parallel
Strand 6
A
187 197parallel
Strand 7
A
219 223parallel
Strand 8
A
317 322parallel
Strand 9
A
416 421parallel
Strand 10
A
499 503parallel
Strand 11
A
510 512anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 65first strand
Strand 2
A
88 89parallel
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There are 12 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
56 58first strand
Strand 2
B
13 19parallel
Strand 3
B
24 32anti-parallel
Strand 4
B
94 100anti-parallel
Strand 5
B
140 144anti-parallel
Strand 6
B
107 113parallel
Strand 7
B
187 196parallel
Strand 8
B
219 223parallel
Strand 9
B
317 322parallel
Strand 10
B
416 421parallel
Strand 11
B
499 503parallel
Strand 12
B
510 512anti-parallel
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