Analysis of interatomic Contacts of Structural Units in PDB entry:
6ESL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ESL entry

There are 2 chains in PDB entry 6ESL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 3GLU 378
B
 VAL 5GLU 378
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 6ESL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 17Right-handed alpha
Helix 2
AA2
A
41 53Right-handed alpha
Helix 3
AA3
A
73 80Right-handed alpha
Helix 4
AA4
A
102 111Right-handed alpha
Helix 5
AA5
A
114 128Right-handed alpha
Helix 6
AA6
A
135 156Right-handed alpha
Helix 7
AA7
A
208 225Right-handed alpha
Helix 8
AA8
A
240 244Right-handed 310
Helix 9
AA9
A
245 258Right-handed alpha
Helix 10
AB1
A
290 305Right-handed alpha
Helix 11
AB2
A
320 326Right-handed alpha
Helix 12
AB3
A
352 356Right-handed 310
Helix 13
AB4
A
357 377Right-handed alpha
Helix 14
AB5
B
13 17Right-handed alpha
Helix 15
AB6
B
41 53Right-handed alpha
Helix 16
AB7
B
73 80Right-handed alpha
Helix 17
AB8
B
102 111Right-handed alpha
Helix 18
AB9
B
114 128Right-handed alpha
Helix 19
AC1
B
135 156Right-handed alpha
Helix 20
AC2
B
208 225Right-handed alpha
Helix 21
AC3
B
240 244Right-handed 310
Helix 22
AC4
B
245 258Right-handed alpha
Helix 23
AC5
B
290 305Right-handed alpha
Helix 24
AC6
B
320 326Right-handed alpha
Helix 25
AC7
B
352 356Right-handed 310
Helix 26
AC8
B
357 377Right-handed alpha
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There are 6 sheets in PDB entry 6ESL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 28first strand
Strand 2
A
32 38anti-parallel
Strand 3
A
6 12anti-parallel
Strand 4
A
58 59anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
161 168first strand
Strand 2
A
171 180anti-parallel
Strand 3
A
233 238anti-parallel
Strand 4
A
188 194parallel
Strand 5
A
262 267parallel
Strand 6
A
331 332parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
309 312first strand
Strand 2
A
282 285parallel
Strand 3
A
334 335anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
24 28first strand
Strand 2
B
32 38anti-parallel
Strand 3
B
6 12anti-parallel
Strand 4
B
58 59anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
161 168first strand
Strand 2
B
171 180anti-parallel
Strand 3
B
233 238anti-parallel
Strand 4
B
188 194parallel
Strand 5
B
262 267parallel
Strand 6
B
331 332parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
309 312first strand
Strand 2
B
282 285parallel
Strand 3
B
334 335anti-parallel
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