Analysis of interatomic Contacts of Structural Units in PDB entry:
6ESV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ESV entry

There is 1 chain in PDB entry 6ESV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 42GLY 304
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 6ESV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
60 77Right-handed alpha
Helix 2
AA2
A
87 97Right-handed alpha
Helix 3
AA3
A
106 113Right-handed alpha
Helix 4
AA4
A
145 150Right-handed 310
Helix 5
AA5
A
165 175Right-handed alpha
Helix 6
AA6
A
178 183Right-handed alpha
Helix 7
AA7
A
191 201Right-handed alpha
Helix 8
AA8
A
211 221Right-handed alpha
Helix 9
AA9
A
221 226Right-handed alpha
Helix 10
AB1
A
247 249Right-handed 310
Helix 11
AB2
A
251 263Right-handed alpha
Helix 12
AB3
A
264 266Right-handed 310
Helix 13
AB4
A
267 278Right-handed alpha
Helix 14
AB5
A
286 289Right-handed 310
Helix 15
AB6
A
290 303Right-handed alpha
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There are 3 sheets in PDB entry 6ESV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 84first strand
Strand 2
A
49 53parallel
Strand 3
A
102 104parallel
Strand 4
A
242 245anti-parallel
Strand 5
A
117 124anti-parallel
Strand 6
A
281 283anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 131first strand
Strand 2
A
237 238anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 188first strand
Strand 2
A
153 156parallel
Strand 3
A
206 210parallel
Strand 4
A
133 138anti-parallel
Strand 5
A
228 233anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il