Analysis of interatomic Contacts of Structural Units in PDB entry:
6EU6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6EU6 entry

There is 1 chain in PDB entry 6EU6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 1ALA 405
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 6EU6. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
1 35Right-handed alpha
Helix 2
AA2
A
36 38Right-handed 310
Helix 3
AA3
A
39 61Right-handed alpha
Helix 4
AA4
A
61 68Right-handed alpha
Helix 5
AA5
A
79 83Right-handed 310
Helix 6
AA6
A
84 88Right-handed 310
Helix 7
AA7
A
92 115Right-handed alpha
Helix 8
AA8
A
120 134Right-handed alpha
Helix 9
AA9
A
134 145Right-handed alpha
Helix 10
AB1
A
154 159Right-handed alpha
Helix 11
AB2
A
170 186Right-handed alpha
Helix 12
AB3
A
205 227Right-handed alpha
Helix 13
AB4
A
233 262Right-handed alpha
Helix 14
AB5
A
265 281Right-handed alpha
Helix 15
AB6
A
288 313Right-handed alpha
Helix 16
AB7
A
321 341Right-handed alpha
Helix 17
AB8
A
342 346Right-handed 310
Helix 18
AB9
A
352 386Right-handed alpha
Helix 19
AC1
A
391 398Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6EU6.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
70 71first strand
Strand 2
A
75 76anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il