Analysis of interatomic Contacts of Structural Units in PDB entry:
6EUD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6EUD entry

There is 1 chain in PDB entry 6EUD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA -2THR 805
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 6EUD. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 8Right-handed 310
Helix 2
AA2
A
9 18Right-handed alpha
Helix 3
AA3
A
28 32Right-handed 310
Helix 4
AA4
A
36 43Right-handed alpha
Helix 5
AA5
A
57 72Right-handed alpha
Helix 6
AA6
A
102 111Right-handed alpha
Helix 7
AA7
A
124 128Right-handed 310
Helix 8
AA8
A
129 143Right-handed alpha
Helix 9
AA9
A
163 168Right-handed alpha
Helix 10
AB1
A
195 211Right-handed alpha
Helix 11
AB2
A
221 234Right-handed alpha
Helix 12
AB3
A
252 259Right-handed alpha
Helix 13
AB4
A
273 276Right-handed 310
Helix 14
AB5
A
313 323Right-handed alpha
Helix 15
AB6
A
337 344Right-handed alpha
Helix 16
AB7
A
350 354Right-handed 310
Helix 17
AB8
A
357 368Right-handed alpha
Helix 18
AB9
A
371 375Right-handed 310
Helix 19
AC1
A
382 396Right-handed alpha
Helix 20
AC2
A
405 415Right-handed alpha
Helix 21
AC3
A
417 427Right-handed alpha
Helix 22
AC4
A
429 445Right-handed alpha
Helix 23
AC5
A
453 460Right-handed alpha
Helix 24
AC6
A
462 477Right-handed alpha
Helix 25
AC7
A
484 486Right-handed 310
Helix 26
AC8
A
487 496Right-handed alpha
Helix 27
AC9
A
524 529Right-handed 310
Helix 28
AD1
A
555 563Right-handed alpha
Helix 29
AD2
A
564 567Right-handed 310
Helix 30
AD3
A
604 620Right-handed alpha
Helix 31
AD4
A
621 624Right-handed 310
Helix 32
AD5
A
627 644Right-handed alpha
Helix 33
AD6
A
653 660Right-handed alpha
Helix 34
AD7
A
660 665Right-handed alpha
Helix 35
AD8
A
666 669Right-handed 310
Helix 36
AD9
A
674 681Right-handed 310
Helix 37
AE1
A
682 690Right-handed alpha
Helix 38
AE2
A
692 703Right-handed alpha
Helix 39
AE3
A
732 735Right-handed 310
Helix 40
AE4
A
767 774Right-handed alpha
Helix 41
AE5
A
775 787Right-handed alpha
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There are 8 sheets in PDB entry 6EUD. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 89first strand
Strand 2
A
80 84anti-parallel
Strand 3
A
96 99parallel
Strand 4
A
50 54parallel
Strand 5
A
117 122parallel
Strand 6
A
151 156parallel
Strand 7
A
23 26parallel
Strand 8
A
173 175parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
183 187first strand
Strand 2
A
330 334parallel
Strand 3
A
284 289parallel
Strand 4
A
214 218parallel
Strand 5
A
266 271parallel
Strand 6
A
240 245parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
292 298first strand
Strand 2
A
305 311anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
399 400first strand
Strand 2
A
403 404anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
500 503first strand
Strand 2
A
509 512anti-parallel
Strand 3
A
517 519anti-parallel
Strand 4
A
545 553parallel
Strand 5
A
531 539anti-parallel
Strand 6
A
500 503anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
568 576first strand
Strand 2
A
581 590anti-parallel
Strand 3
A
593 599anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
706 708first strand
Strand 2
A
714 718anti-parallel
Strand 3
A
726 730anti-parallel
Strand 4
A
751 755parallel
Strand 5
A
761 765anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
742 743first strand
Strand 2
A
748 749anti-parallel
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