Analysis of interatomic Contacts of Structural Units in PDB entry:
6EUG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6EUG entry

There is 1 chain in PDB entry 6EUG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 5ASP 351
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 7 helices in PDB entry 6EUG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
148 154Right-handed alpha
Helix 2
AA2
A
157 161Right-handed 310
Helix 3
AA3
A
166 175Right-handed alpha
Helix 4
AA4
A
176 183Right-handed alpha
Helix 5
AA5
A
289 296Right-handed 310
Helix 6
AA6
A
305 308Right-handed 310
Helix 7
AA7
A
321 325Right-handed 310
Back to top of page

There are 6 sheets in PDB entry 6EUG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 30first strand
Strand 2
A
33 39anti-parallel
Strand 3
A
51 57anti-parallel
Strand 4
A
64 71anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 94first strand
Strand 2
A
99 107anti-parallel
Strand 3
A
117 123anti-parallel
Strand 4
A
131 136anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
192 196first strand
Strand 2
A
202 208anti-parallel
Strand 3
A
213 219anti-parallel
Strand 4
A
226 233anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
240 247first strand
Strand 2
A
250 256anti-parallel
Strand 3
A
267 271anti-parallel
Strand 4
A
279 281anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
297 304first strand
Strand 2
A
309 316anti-parallel
Strand 3
A
326 331anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
333 334first strand
Strand 2
A
340 341anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il