Analysis of interatomic Contacts of Structural Units in PDB entry:
6EUH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6EUH entry

There are 3 chains in PDB entry 6EUH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 6	PHE 350
B	ILE 6	PHE 350
C	ILE 6	PHE 350

There are 19 helices in PDB entry 6EUH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	148	153	Right-handed alpha
Helix 2	AA2	A	157	162	Right-handed 310
Helix 3	AA3	A	166	175	Right-handed alpha
Helix 4	AA4	A	176	183	Right-handed alpha
Helix 5	AA5	A	289	296	Right-handed 310
Helix 6	AA6	A	305	308	Right-handed 310
Helix 7	AA7	A	321	325	Right-handed 310
Helix 8	AA8	B	148	153	Right-handed alpha
Helix 9	AA9	B	166	175	Right-handed alpha
Helix 10	AB1	B	176	182	Right-handed alpha
Helix 11	AB2	B	289	296	Right-handed 310
Helix 12	AB3	B	305	308	Right-handed 310
Helix 13	AB4	B	321	325	Right-handed 310
Helix 14	AB5	C	148	154	Right-handed alpha
Helix 15	AB6	C	157	162	Right-handed 310
Helix 16	AB7	C	166	176	Right-handed alpha
Helix 17	AB8	C	176	183	Right-handed alpha
Helix 18	AB9	C	289	296	Right-handed 310
Helix 19	AC1	C	321	325	Right-handed 310

There are 15 sheets in PDB entry 6EUH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	23	30	first strand
Strand 2	A	33	39	anti-parallel
Strand 3	A	51	57	anti-parallel
Strand 4	A	64	71	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	85	94	first strand
Strand 2	A	99	107	anti-parallel
Strand 3	A	117	123	anti-parallel
Strand 4	A	131	136	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	192	196	first strand
Strand 2	A	202	208	anti-parallel
Strand 3	A	213	219	anti-parallel
Strand 4	A	226	233	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	240	247	first strand
Strand 2	A	250	256	anti-parallel
Strand 3	A	267	271	anti-parallel
Strand 4	A	279	281	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	297	304	first strand
Strand 2	A	309	316	anti-parallel
Strand 3	A	326	334	anti-parallel
Strand 4	A	340	342	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	23	30	first strand
Strand 2	B	33	39	anti-parallel
Strand 3	B	51	57	anti-parallel
Strand 4	B	64	71	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	85	93	first strand
Strand 2	B	100	107	anti-parallel
Strand 3	B	117	123	anti-parallel
Strand 4	B	131	136	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	192	196	first strand
Strand 2	B	202	208	anti-parallel
Strand 3	B	213	219	anti-parallel
Strand 4	B	226	233	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	240	247	first strand
Strand 2	B	250	256	anti-parallel
Strand 3	B	267	271	anti-parallel
Strand 4	B	279	281	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	285	286	first strand
Strand 2	B	340	343	parallel
Strand 3	B	326	334	anti-parallel
Strand 4	B	309	316	anti-parallel
Strand 5	B	297	304	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	23	30	first strand
Strand 2	C	33	39	anti-parallel
Strand 3	C	51	57	anti-parallel
Strand 4	C	64	71	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	85	94	first strand
Strand 2	C	99	107	anti-parallel
Strand 3	C	117	123	anti-parallel
Strand 4	C	131	136	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	192	196	first strand
Strand 2	C	202	208	anti-parallel
Strand 3	C	213	219	anti-parallel
Strand 4	C	226	233	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	240	247	first strand
Strand 2	C	250	256	anti-parallel
Strand 3	C	267	271	anti-parallel
Strand 4	C	279	281	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	285	286	first strand
Strand 2	C	340	343	parallel
Strand 3	C	326	334	anti-parallel
Strand 4	C	309	316	anti-parallel
Strand 5	C	297	304	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6EUH

Analysis of interatomic Contacts of Structural Units in PDB entry:
6EUH