Analysis of interatomic Contacts of Structural Units in PDB entry:
6EUS

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6EUS entry

There are 4 chains in PDB entry 6EUS (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 60	PHE 405
B	LEU 60	PHE 405
C	LEU 60	PHE 405
D	LEU 60	LEU 330

There are 7 helices in PDB entry 6EUS. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	345	351	Right-handed alpha
Helix 2	AA2	B	239	241	Right-handed 310
Helix 3	AA3	B	345	351	Right-handed alpha
Helix 4	AA4	C	345	351	Right-handed alpha
Helix 5	AA5	D	345	351	Right-handed alpha
Helix 6	AA6	E	345	351	Right-handed alpha
Helix 7	AA7	F	345	351	Right-handed alpha

There are 18 sheets in PDB entry 6EUS. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R,

There are 19 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	402	405	first strand
Strand 2	A	70	78	anti-parallel
Strand 3	A	114	123	anti-parallel
Strand 4	A	126	135	anti-parallel
Strand 5	A	148	156	anti-parallel
Strand 6	A	159	165	anti-parallel
Strand 7	A	189	200	anti-parallel
Strand 8	A	203	210	anti-parallel
Strand 9	A	229	238	anti-parallel
Strand 10	A	243	256	anti-parallel
Strand 11	A	261	274	anti-parallel
Strand 12	A	284	290	anti-parallel
Strand 13	A	314	327	anti-parallel
Strand 14	A	330	341	anti-parallel
Strand 15	A	355	367	anti-parallel
Strand 16	A	375	386	anti-parallel
Strand 17	A	395	399	anti-parallel
Strand 18	A	80	86	anti-parallel
Strand 19	A	105	109	anti-parallel

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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	303	306	first strand
Strand 2	A	309	312	anti-parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	383	385	first strand
Strand 2	A	391	393	anti-parallel

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There are 19 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	402	405	first strand
Strand 2	B	70	78	anti-parallel
Strand 3	B	114	120	anti-parallel
Strand 4	B	128	135	anti-parallel
Strand 5	B	148	156	anti-parallel
Strand 6	B	159	165	anti-parallel
Strand 7	B	189	200	anti-parallel
Strand 8	B	203	210	anti-parallel
Strand 9	B	229	238	anti-parallel
Strand 10	B	243	256	anti-parallel
Strand 11	B	261	274	anti-parallel
Strand 12	B	284	290	anti-parallel
Strand 13	B	314	327	anti-parallel
Strand 14	B	330	341	anti-parallel
Strand 15	B	355	367	anti-parallel
Strand 16	B	375	386	anti-parallel
Strand 17	B	395	399	anti-parallel
Strand 18	B	80	86	anti-parallel
Strand 19	B	105	109	anti-parallel

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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	303	306	first strand
Strand 2	B	309	312	anti-parallel

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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	383	385	first strand
Strand 2	B	391	393	anti-parallel

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There are 19 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	402	405	first strand
Strand 2	C	70	78	anti-parallel
Strand 3	C	114	120	anti-parallel
Strand 4	C	128	135	anti-parallel
Strand 5	C	148	156	anti-parallel
Strand 6	C	159	165	anti-parallel
Strand 7	C	189	200	anti-parallel
Strand 8	C	203	210	anti-parallel
Strand 9	C	229	238	anti-parallel
Strand 10	C	243	256	anti-parallel
Strand 11	C	261	274	anti-parallel
Strand 12	C	284	290	anti-parallel
Strand 13	C	314	327	anti-parallel
Strand 14	C	330	341	anti-parallel
Strand 15	C	355	367	anti-parallel
Strand 16	C	375	386	anti-parallel
Strand 17	C	395	399	anti-parallel
Strand 18	C	80	86	anti-parallel
Strand 19	C	105	109	anti-parallel

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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	303	306	first strand
Strand 2	C	309	312	anti-parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	383	385	first strand
Strand 2	C	391	393	anti-parallel

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There are 19 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	402	405	first strand
Strand 2	D	70	78	anti-parallel
Strand 3	D	114	123	anti-parallel
Strand 4	D	126	135	anti-parallel
Strand 5	D	148	156	anti-parallel
Strand 6	D	159	165	anti-parallel
Strand 7	D	189	200	anti-parallel
Strand 8	D	203	210	anti-parallel
Strand 9	D	229	238	anti-parallel
Strand 10	D	243	256	anti-parallel
Strand 11	D	261	274	anti-parallel
Strand 12	D	284	290	anti-parallel
Strand 13	D	314	327	anti-parallel
Strand 14	D	330	341	anti-parallel
Strand 15	D	355	367	anti-parallel
Strand 16	D	375	386	anti-parallel
Strand 17	D	395	399	anti-parallel
Strand 18	D	80	86	anti-parallel
Strand 19	D	105	109	anti-parallel

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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	303	306	first strand
Strand 2	D	309	312	anti-parallel

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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	383	385	first strand
Strand 2	D	391	393	anti-parallel

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There are 19 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	402	405	first strand
Strand 2	E	70	78	anti-parallel
Strand 3	E	114	121	anti-parallel
Strand 4	E	128	135	anti-parallel
Strand 5	E	148	156	anti-parallel
Strand 6	E	159	165	anti-parallel
Strand 7	E	189	200	anti-parallel
Strand 8	E	203	210	anti-parallel
Strand 9	E	229	238	anti-parallel
Strand 10	E	243	256	anti-parallel
Strand 11	E	261	274	anti-parallel
Strand 12	E	284	290	anti-parallel
Strand 13	E	314	327	anti-parallel
Strand 14	E	330	341	anti-parallel
Strand 15	E	355	367	anti-parallel
Strand 16	E	375	386	anti-parallel
Strand 17	E	395	399	anti-parallel
Strand 18	E	80	86	anti-parallel
Strand 19	E	105	109	anti-parallel

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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	303	306	first strand
Strand 2	E	309	312	anti-parallel

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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	383	385	first strand
Strand 2	E	391	393	anti-parallel

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There are 19 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	402	405	first strand
Strand 2	F	70	78	anti-parallel
Strand 3	F	114	120	anti-parallel
Strand 4	F	128	135	anti-parallel
Strand 5	F	148	156	anti-parallel
Strand 6	F	159	165	anti-parallel
Strand 7	F	189	200	anti-parallel
Strand 8	F	203	210	anti-parallel
Strand 9	F	229	238	anti-parallel
Strand 10	F	243	256	anti-parallel
Strand 11	F	261	274	anti-parallel
Strand 12	F	284	290	anti-parallel
Strand 13	F	314	327	anti-parallel
Strand 14	F	330	341	anti-parallel
Strand 15	F	355	367	anti-parallel
Strand 16	F	375	386	anti-parallel
Strand 17	F	395	399	anti-parallel
Strand 18	F	80	86	anti-parallel
Strand 19	F	105	109	anti-parallel

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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	303	306	first strand
Strand 2	F	309	312	anti-parallel

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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	383	385	first strand
Strand 2	F	391	393	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6EUS

Analysis of interatomic Contacts of Structural Units in PDB entry:
6EUS