Analysis of interatomic Contacts of Structural Units in PDB entry:
6EUV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6EUV entry

There are 4 chains in PDB entry 6EUV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 252	SER 532
C	GLU 249	SER 534
F	ASN 252	SER 532
I	ASN 252	SER 534

There are 36 helices in PDB entry 6EUV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	252	271	Right-handed alpha
Helix 2	AA2	A	275	286	Right-handed alpha
Helix 3	AA3	A	294	301	Right-handed alpha
Helix 4	AA4	A	305	315	Right-handed alpha
Helix 5	AA5	A	390	405	Right-handed alpha
Helix 6	AA6	A	407	413	Right-handed alpha
Helix 7	AA7	A	429	441	Right-handed alpha
Helix 8	AA8	A	442	450	Right-handed alpha
Helix 9	AA9	A	514	518	Right-handed 310
Helix 10	AB1	C	251	271	Right-handed alpha
Helix 11	AB2	C	275	286	Right-handed alpha
Helix 12	AB3	C	294	301	Right-handed alpha
Helix 13	AB4	C	305	315	Right-handed alpha
Helix 14	AB5	C	390	405	Right-handed alpha
Helix 15	AB6	C	407	413	Right-handed alpha
Helix 16	AB7	C	429	441	Right-handed alpha
Helix 17	AB8	C	442	450	Right-handed alpha
Helix 18	AB9	C	514	518	Right-handed 310
Helix 19	AC1	F	253	271	Right-handed alpha
Helix 20	AC2	F	275	286	Right-handed alpha
Helix 21	AC3	F	294	301	Right-handed alpha
Helix 22	AC4	F	305	315	Right-handed alpha
Helix 23	AC5	F	390	405	Right-handed alpha
Helix 24	AC6	F	407	413	Right-handed alpha
Helix 25	AC7	F	429	441	Right-handed alpha
Helix 26	AC8	F	442	450	Right-handed alpha
Helix 27	AC9	F	514	518	Right-handed 310
Helix 28	AD1	I	253	271	Right-handed alpha
Helix 29	AD2	I	275	286	Right-handed alpha
Helix 30	AD3	I	294	301	Right-handed alpha
Helix 31	AD4	I	305	315	Right-handed alpha
Helix 32	AD5	I	390	405	Right-handed alpha
Helix 33	AD6	I	407	413	Right-handed alpha
Helix 34	AD7	I	429	441	Right-handed alpha
Helix 35	AD8	I	442	450	Right-handed alpha
Helix 36	AD9	I	514	518	Right-handed 310

There are 24 sheets in PDB entry 6EUV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	292	293	first strand
Strand 2	A	288	289	anti-parallel
Strand 3	A	529	530	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	319	320	first strand
Strand 2	A	493	494	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	323	325	first strand
Strand 2	A	328	335	anti-parallel
Strand 3	A	361	366	anti-parallel
Strand 4	A	370	377	anti-parallel
Strand 5	A	380	388	anti-parallel
Strand 6	A	478	480	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	338	345	first strand
Strand 2	A	351	358	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	451	453	first strand
Strand 2	A	473	475	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	462	463	first strand
Strand 2	A	469	470	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	511	513	first strand
Strand 2	A	504	505	anti-parallel
Strand 3	A	497	499	anti-parallel
Strand 4	I	497	499	anti-parallel
Strand 5	I	504	505	anti-parallel
Strand 6	I	511	513	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	292	293	first strand
Strand 2	C	288	289	anti-parallel
Strand 3	C	529	530	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	319	320	first strand
Strand 2	C	493	494	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	323	325	first strand
Strand 2	C	328	345	anti-parallel
Strand 3	C	351	366	anti-parallel
Strand 4	C	370	377	anti-parallel
Strand 5	C	380	388	anti-parallel
Strand 6	C	478	480	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	451	453	first strand
Strand 2	C	473	475	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	462	463	first strand
Strand 2	C	469	470	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	511	513	first strand
Strand 2	C	504	505	anti-parallel
Strand 3	C	497	499	anti-parallel
Strand 4	F	497	499	anti-parallel
Strand 5	F	504	505	anti-parallel
Strand 6	F	511	513	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	292	293	first strand
Strand 2	F	288	289	anti-parallel
Strand 3	F	529	530	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	319	320	first strand
Strand 2	F	493	494	anti-parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	323	325	first strand
Strand 2	F	328	335	anti-parallel
Strand 3	F	361	366	anti-parallel
Strand 4	F	370	377	anti-parallel
Strand 5	F	380	388	anti-parallel
Strand 6	F	478	480	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	338	345	first strand
Strand 2	F	351	358	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	451	453	first strand
Strand 2	F	473	475	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	462	463	first strand
Strand 2	F	469	470	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	292	293	first strand
Strand 2	I	288	289	anti-parallel
Strand 3	I	529	530	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	319	320	first strand
Strand 2	I	493	494	anti-parallel

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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	323	325	first strand
Strand 2	I	328	345	anti-parallel
Strand 3	I	351	366	anti-parallel
Strand 4	I	370	377	anti-parallel
Strand 5	I	380	388	anti-parallel
Strand 6	I	478	480	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	451	453	first strand
Strand 2	I	473	475	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	462	463	first strand
Strand 2	I	469	470	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6EUV

Analysis of interatomic Contacts of Structural Units in PDB entry:
6EUV