Analysis of interatomic Contacts of Structural Units in PDB entry:
6EVG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6EVG entry

There is 1 chain in PDB entry 6EVG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 22VAL 507
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 8 helices in PDB entry 6EVG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
98 102Right-handed 310
Helix 2
AA2
A
137 145Right-handed alpha
Helix 3
AA3
A
190 197Right-handed alpha
Helix 4
AA4
A
325 329Right-handed 310
Helix 5
AA5
A
340 349Right-handed alpha
Helix 6
AA6
A
393 397Right-handed 310
Helix 7
AA7
A
454 458Right-handed 310
Helix 8
AA8
A
492 498Right-handed alpha
Back to top of page

There are 7 sheets in PDB entry 6EVG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 29first strand
Strand 2
A
67 71parallel
Strand 3
A
148 153parallel
Strand 4
A
126 131anti-parallel
Strand 5
A
91 93anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 59first strand
Strand 2
A
36 46anti-parallel
Strand 3
A
75 82parallel
Strand 4
A
114 115anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 59first strand
Strand 2
A
36 46anti-parallel
Strand 3
A
75 82parallel
Strand 4
A
118 120anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
208 209first strand
Strand 2
A
202 205anti-parallel
Strand 3
A
170 178anti-parallel
Strand 4
A
219 226parallel
Strand 5
A
269 275anti-parallel
Strand 6
A
243 248anti-parallel
Strand 7
A
251 259anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
212 215first strand
Strand 2
A
295 303parallel
Strand 3
A
282 287anti-parallel
Strand 4
A
233 237anti-parallel
Strand 5
A
262 264anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
332 336first strand
Strand 2
A
422 428parallel
Strand 3
A
469 475anti-parallel
Strand 4
A
442 448anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
415 418first strand
Strand 2
A
501 507parallel
Strand 3
A
486 490anti-parallel
Strand 4
A
434 438anti-parallel
Strand 5
A
463 466anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il