Analysis of interatomic Contacts of Structural Units in PDB entry:
6EWP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6EWP entry

There are 3 chains in PDB entry 6EWP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 447LYS 612
B
 LYS 447PHE 617
C
 ALA 453SER 619
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 6EWP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
483 487Right-handed 310
Helix 2
AA2
A
520 531Right-handed alpha
Helix 3
AA3
A
555 562Right-handed 310
Helix 4
AA4
B
483 487Right-handed 310
Helix 5
AA5
B
520 531Right-handed alpha
Helix 6
AA6
B
555 562Right-handed 310
Helix 7
AA7
C
483 487Right-handed 310
Helix 8
AA8
C
520 531Right-handed alpha
Helix 9
AA9
C
556 562Right-handed alpha
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There are 8 sheets in PDB entry 6EWP. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
512 519first strand
Strand 2
A
455 467anti-parallel
Strand 3
A
595 607anti-parallel
Strand 4
A
576 588anti-parallel
Strand 5
A
547 554anti-parallel
Strand 6
A
533 539anti-parallel
Strand 7
A
475 481anti-parallel
Strand 8
A
498 500anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
565 568first strand
Strand 2
A
574 577anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
512 519first strand
Strand 2
B
455 467anti-parallel
Strand 3
B
595 607anti-parallel
Strand 4
B
574 587anti-parallel
Strand 5
B
565 568anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
465 467first strand
Strand 2
B
505 507anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
498 500first strand
Strand 2
B
475 481anti-parallel
Strand 3
B
533 539anti-parallel
Strand 4
B
547 554anti-parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
512 519first strand
Strand 2
C
455 467anti-parallel
Strand 3
C
595 607anti-parallel
Strand 4
C
576 588anti-parallel
Strand 5
C
547 554anti-parallel
Strand 6
C
533 539anti-parallel
Strand 7
C
475 480anti-parallel
Strand 8
C
498 500anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
465 467first strand
Strand 2
C
505 507anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
565 568first strand
Strand 2
C
574 577anti-parallel
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