Analysis of interatomic Contacts of Structural Units in PDB entry:
6EXD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6EXD entry

There are 2 chains in PDB entry 6EXD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 158PRO 380
B
 PRO 158GLU 379
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 6EXD. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
164 172Right-handed alpha
Helix 2
AA2
A
196 209Right-handed alpha
Helix 3
AA3
A
214 218Right-handed 310
Helix 4
AA4
A
219 234Right-handed alpha
Helix 5
AA5
A
236 254Right-handed alpha
Helix 6
AA6
A
257 260Right-handed 310
Helix 7
AA7
A
261 269Right-handed alpha
Helix 8
AA8
A
271 281Right-handed alpha
Helix 9
AA9
A
283 296Right-handed alpha
Helix 10
AB1
A
302 307Right-handed 310
Helix 11
AB2
A
308 313Right-handed alpha
Helix 12
AB3
A
313 322Right-handed alpha
Helix 13
AB4
A
329 331Right-handed 310
Helix 14
AB5
A
332 346Right-handed alpha
Helix 15
AB6
A
354 367Right-handed alpha
Helix 16
AB7
A
371 377Right-handed alpha
Helix 17
AB8
B
164 172Right-handed alpha
Helix 18
AB9
B
178 183Right-handed alpha
Helix 19
AC1
B
196 209Right-handed alpha
Helix 20
AC2
B
214 218Right-handed 310
Helix 21
AC3
B
219 234Right-handed alpha
Helix 22
AC4
B
236 254Right-handed alpha
Helix 23
AC5
B
257 260Right-handed 310
Helix 24
AC6
B
261 269Right-handed alpha
Helix 25
AC7
B
271 281Right-handed alpha
Helix 26
AC8
B
283 296Right-handed alpha
Helix 27
AC9
B
302 307Right-handed 310
Helix 28
AD1
B
308 313Right-handed alpha
Helix 29
AD2
B
313 323Right-handed alpha
Helix 30
AD3
B
329 331Right-handed 310
Helix 31
AD4
B
332 346Right-handed alpha
Helix 32
AD5
B
354 366Right-handed alpha
Helix 33
AD6
B
371 378Right-handed alpha
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There are 2 sheets in PDB entry 6EXD. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
175 176first strand
Strand 2
A
194 195anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
175 176first strand
Strand 2
B
194 195anti-parallel
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