Analysis of interatomic Contacts of Structural Units in PDB entry:
6EY0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6EY0 entry

There are 8 chains in PDB entry 6EY0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 70	LYS 216
B	THR 69	LYS 216
C	ASN 70	LYS 216
D	LYS 73	LYS 216
E	ASP 1	SER 112
F	ASP 1	HIS 118
G	ASP 1	HIS 116
H	VAL 2	SER 112

There are 40 helices in PDB entry 6EY0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	73	107	Right-handed alpha
Helix 2	AA2	A	122	131	Right-handed alpha
Helix 3	AA3	A	136	155	Right-handed alpha
Helix 4	AA4	A	158	169	Right-handed alpha
Helix 5	AA5	A	178	185	Right-handed alpha
Helix 6	AA6	A	188	216	Right-handed alpha
Helix 7	AA7	B	73	108	Right-handed alpha
Helix 8	AA8	B	123	131	Right-handed alpha
Helix 9	AA9	B	136	155	Right-handed alpha
Helix 10	AB1	B	158	169	Right-handed alpha
Helix 11	AB2	B	178	185	Right-handed alpha
Helix 12	AB3	B	188	215	Right-handed alpha
Helix 13	AB4	C	73	108	Right-handed alpha
Helix 14	AB5	C	122	131	Right-handed alpha
Helix 15	AB6	C	136	155	Right-handed alpha
Helix 16	AB7	C	159	169	Right-handed alpha
Helix 17	AB8	C	178	185	Right-handed alpha
Helix 18	AB9	C	188	216	Right-handed alpha
Helix 19	AC1	D	74	108	Right-handed alpha
Helix 20	AC2	D	123	131	Right-handed alpha
Helix 21	AC3	D	136	155	Right-handed alpha
Helix 22	AC4	D	158	169	Right-handed alpha
Helix 23	AC5	D	178	185	Right-handed alpha
Helix 24	AC6	D	188	216	Right-handed alpha
Helix 25	AC7	E	27	32	Right-handed alpha
Helix 26	AC8	E	83	87	Right-handed 310
Helix 27	AC9	E	99	100	Right-handed alpha
Helix 28	AD1	E	100	100	Right-handed 310
Helix 29	AD2	F	27	32	Right-handed alpha
Helix 30	AD3	F	83	87	Right-handed 310
Helix 31	AD4	F	99	100	Right-handed alpha
Helix 32	AD5	F	100	100	Right-handed 310
Helix 33	AD6	G	27	32	Right-handed alpha
Helix 34	AD7	G	83	87	Right-handed 310
Helix 35	AD8	G	99	100	Right-handed alpha
Helix 36	AD9	G	100	100	Right-handed 310
Helix 37	AE1	H	27	32	Right-handed alpha
Helix 38	AE2	H	83	87	Right-handed 310
Helix 39	AE3	H	99	100	Right-handed alpha
Helix 40	AE4	H	100	100	Right-handed 310

There are 13 sheets in PDB entry 6EY0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	4	7	first strand
Strand 2	E	18	24	anti-parallel
Strand 3	E	77	82	anti-parallel
Strand 4	E	67	72	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	11	12	first strand
Strand 2	E	107	111	parallel
Strand 3	E	88	95	anti-parallel
Strand 4	E	33	39	anti-parallel
Strand 5	E	46	51	anti-parallel
Strand 6	E	57	59	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	11	12	first strand
Strand 2	E	107	111	parallel
Strand 3	E	88	95	anti-parallel
Strand 4	E	102	103	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	4	7	first strand
Strand 2	F	18	24	anti-parallel
Strand 3	F	77	82	anti-parallel
Strand 4	F	67	72	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	11	13	first strand
Strand 2	F	107	112	parallel
Strand 3	F	88	95	anti-parallel
Strand 4	F	33	39	anti-parallel
Strand 5	F	46	51	anti-parallel
Strand 6	F	57	59	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	11	13	first strand
Strand 2	F	107	112	parallel
Strand 3	F	88	95	anti-parallel
Strand 4	F	102	103	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	4	7	first strand
Strand 2	G	18	24	anti-parallel
Strand 3	G	77	82	anti-parallel
Strand 4	G	67	72	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	11	13	first strand
Strand 2	G	107	112	parallel
Strand 3	G	88	95	anti-parallel
Strand 4	G	33	39	anti-parallel
Strand 5	G	46	51	anti-parallel
Strand 6	G	57	59	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	11	13	first strand
Strand 2	G	107	112	parallel
Strand 3	G	88	95	anti-parallel
Strand 4	G	102	103	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	4	7	first strand
Strand 2	H	18	24	anti-parallel
Strand 3	H	77	82	anti-parallel
Strand 4	H	67	72	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	12	13	first strand
Strand 2	H	111	112	parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	57	59	first strand
Strand 2	H	46	51	anti-parallel
Strand 3	H	33	39	anti-parallel
Strand 4	H	88	95	anti-parallel
Strand 5	H	102	103	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	57	59	first strand
Strand 2	H	46	51	anti-parallel
Strand 3	H	33	39	anti-parallel
Strand 4	H	88	95	anti-parallel
Strand 5	H	107	109	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6EY0

Analysis of interatomic Contacts of Structural Units in PDB entry:
6EY0