Analysis of interatomic Contacts of Structural Units in PDB entry:
6EY1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6EY1 entry

There is 1 chain in PDB entry 6EY1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 73SER 295
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 6EY1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
82 104Right-handed alpha
Helix 2
AA2
A
113 130Right-handed alpha
Helix 3
AA3
A
162 180Right-handed alpha
Helix 4
AA4
A
231 236Right-handed alpha
Helix 5
AA5
A
243 246Right-handed 310
Helix 6
AA6
A
288 294Right-handed alpha
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There are 3 sheets in PDB entry 6EY1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 108first strand
Strand 2
A
259 263anti-parallel
Strand 3
A
218 225anti-parallel
Strand 4
A
278 287anti-parallel
Strand 5
A
194 200anti-parallel
Strand 6
A
151 155anti-parallel
Strand 7
A
134 135anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 108first strand
Strand 2
A
259 263anti-parallel
Strand 3
A
218 225anti-parallel
Strand 4
A
278 287anti-parallel
Strand 5
A
190 191anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
204 209first strand
Strand 2
A
270 275anti-parallel
Strand 3
A
239 241anti-parallel
Strand 4
A
250 252anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il