Analysis of interatomic Contacts of Structural Units in PDB entry:
6EY5

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6EY5 entry

There are 2 chains in PDB entry 6EY5 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 225	ASN 516
B	ARG 224	ASN 516

There are 6 helices in PDB entry 6EY5. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	270	274	Right-handed 310
Helix 2	AA2	A	425	431	Right-handed alpha
Helix 3	AA3	A	475	484	Right-handed alpha
Helix 4	AA4	B	270	274	Right-handed 310
Helix 5	AA5	B	426	431	Right-handed alpha
Helix 6	AA6	B	475	484	Right-handed alpha

There are 15 sheets in PDB entry 6EY5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	228	234	first strand
Strand 2	A	244	253	anti-parallel
Strand 3	B	276	280	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	238	240	first strand
Strand 2	B	302	314	parallel
Strand 3	B	285	296	anti-parallel
Strand 4	B	261	264	anti-parallel
Strand 5	B	267	268	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	267	268	first strand
Strand 2	A	261	264	anti-parallel
Strand 3	A	285	296	anti-parallel
Strand 4	A	302	314	anti-parallel
Strand 5	B	238	240	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	276	280	first strand
Strand 2	B	244	254	anti-parallel
Strand 3	B	227	234	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	319	322	first strand
Strand 2	B	334	339	anti-parallel
Strand 3	B	363	367	anti-parallel
Strand 4	B	356	360	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	327	330	first strand
Strand 2	A	388	399	parallel
Strand 3	A	374	382	anti-parallel
Strand 4	A	349	352	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	356	360	first strand
Strand 2	A	363	367	anti-parallel
Strand 3	A	334	339	anti-parallel
Strand 4	B	319	322	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	416	419	first strand
Strand 2	A	404	410	anti-parallel
Strand 3	A	436	438	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	422	424	first strand
Strand 2	A	511	515	parallel
Strand 3	A	490	499	anti-parallel
Strand 4	A	449	458	anti-parallel
Strand 5	A	464	468	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	422	424	first strand
Strand 2	A	511	515	parallel
Strand 3	A	490	499	anti-parallel
Strand 4	A	505	507	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	327	329	first strand
Strand 2	B	389	398	parallel
Strand 3	B	374	380	anti-parallel
Strand 4	B	349	352	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	404	406	first strand
Strand 2	B	436	438	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	408	410	first strand
Strand 2	B	416	418	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	422	425	first strand
Strand 2	B	511	516	parallel
Strand 3	B	490	499	anti-parallel
Strand 4	B	449	458	anti-parallel
Strand 5	B	464	468	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	422	425	first strand
Strand 2	B	511	516	parallel
Strand 3	B	490	499	anti-parallel
Strand 4	B	505	508	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6EY5

Analysis of interatomic Contacts of Structural Units in PDB entry:
6EY5