Analysis of interatomic Contacts of Structural Units in PDB entry:
6EY7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6EY7 entry

There are 4 chains in PDB entry 6EY7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 429	SER 674
B	VAL 428	SER 674
C	LEU 429	SER 674
D	LEU 429	SER 674

There are 32 helices in PDB entry 6EY7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	431	440	Right-handed alpha
Helix 2	AA2	A	447	454	Right-handed 310
Helix 3	AA3	A	502	523	Right-handed alpha
Helix 4	AA4	A	538	557	Right-handed alpha
Helix 5	AA5	A	582	597	Right-handed alpha
Helix 6	AA6	A	615	626	Right-handed alpha
Helix 7	AA7	A	650	662	Right-handed alpha
Helix 8	AA8	A	664	669	Right-handed 310
Helix 9	AA9	B	431	440	Right-handed alpha
Helix 10	AB1	B	445	448	Right-handed 310
Helix 11	AB2	B	502	523	Right-handed alpha
Helix 12	AB3	B	538	557	Right-handed alpha
Helix 13	AB4	B	582	597	Right-handed alpha
Helix 14	AB5	B	615	626	Right-handed alpha
Helix 15	AB6	B	650	662	Right-handed alpha
Helix 16	AB7	B	664	669	Right-handed 310
Helix 17	AB8	C	431	440	Right-handed alpha
Helix 18	AB9	C	445	448	Right-handed 310
Helix 19	AC1	C	503	523	Right-handed alpha
Helix 20	AC2	C	538	557	Right-handed alpha
Helix 21	AC3	C	582	597	Right-handed alpha
Helix 22	AC4	C	615	626	Right-handed alpha
Helix 23	AC5	C	650	662	Right-handed alpha
Helix 24	AC6	C	664	669	Right-handed 310
Helix 25	AC7	D	431	440	Right-handed alpha
Helix 26	AC8	D	449	453	Right-handed 310
Helix 27	AC9	D	503	523	Right-handed alpha
Helix 28	AD1	D	538	557	Right-handed alpha
Helix 29	AD2	D	582	597	Right-handed alpha
Helix 30	AD3	D	615	626	Right-handed alpha
Helix 31	AD4	D	650	662	Right-handed alpha
Helix 32	AD5	D	664	669	Right-handed 310

There are 9 sheets in PDB entry 6EY7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	441	443	first strand
Strand 2	B	441	443	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	599	606	first strand
Strand 2	A	486	495	parallel
Strand 3	A	475	483	anti-parallel
Strand 4	A	457	463	anti-parallel
Strand 5	A	528	533	parallel
Strand 6	A	560	564	parallel
Strand 7	A	671	672	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	566	567	first strand
Strand 2	A	573	574	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	599	606	first strand
Strand 2	B	486	495	parallel
Strand 3	B	475	483	anti-parallel
Strand 4	B	457	463	anti-parallel
Strand 5	B	528	533	parallel
Strand 6	B	560	564	parallel
Strand 7	B	671	672	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	566	567	first strand
Strand 2	B	573	574	anti-parallel

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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	671	673	first strand
Strand 2	C	560	564	anti-parallel
Strand 3	C	528	533	parallel
Strand 4	C	457	463	parallel
Strand 5	C	475	483	anti-parallel
Strand 6	C	486	495	anti-parallel
Strand 7	C	599	606	parallel
Strand 8	C	441	443	parallel
Strand 9	D	441	443	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	566	567	first strand
Strand 2	C	573	574	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	599	606	first strand
Strand 2	D	486	495	parallel
Strand 3	D	475	483	anti-parallel
Strand 4	D	457	463	anti-parallel
Strand 5	D	528	533	parallel
Strand 6	D	560	564	parallel
Strand 7	D	671	672	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	566	567	first strand
Strand 2	D	573	574	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6EY7

Analysis of interatomic Contacts of Structural Units in PDB entry:
6EY7