Analysis of interatomic Contacts of Structural Units in PDB entry:
6EZI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6EZI entry

There are 2 chains in PDB entry 6EZI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 372LYS 457
B
LEU 722LEU 729
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 6EZI. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
410 416Right-handed alpha
Helix 2
AA2
A
435 445Right-handed alpha
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There are 2 sheets in PDB entry 6EZI. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
376 382first strand
Strand 2
A
449 455anti-parallel
Strand 3
A
422 426anti-parallel
Strand 4
A
429 430anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
402 404first strand
Strand 2
A
391 395anti-parallel
Strand 3
B
724 728anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il