Analysis of interatomic Contacts of Structural Units in PDB entry:
6EZL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6EZL entry

There are 2 chains in PDB entry 6EZL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 2VAL 400
B
 CYS 3PRO 271
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 6EZL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 25Right-handed alpha
Helix 2
AA2
A
48 58Right-handed alpha
Helix 3
AA3
A
73 86Right-handed alpha
Helix 4
AA4
A
90 92Right-handed 310
Helix 5
AA5
A
101 117Right-handed alpha
Helix 6
AA6
A
131 140Right-handed alpha
Helix 7
AA7
A
159 169Right-handed alpha
Helix 8
AA8
A
191 206Right-handed alpha
Helix 9
AA9
A
222 227Right-handed alpha
Helix 10
AB1
A
227 236Right-handed alpha
Helix 11
AB2
A
266 268Right-handed 310
Helix 12
AB3
A
269 282Right-handed alpha
Helix 13
AB4
A
289 302Right-handed alpha
Helix 14
AB5
A
302 334Right-handed alpha
Helix 15
AB6
A
340 346Right-handed alpha
Helix 16
AB7
A
356 366Right-handed alpha
Helix 17
AB8
A
382 400Right-handed alpha
Helix 18
AB9
B
16 26Right-handed alpha
Helix 19
AC1
B
48 59Right-handed alpha
Helix 20
AC2
B
73 86Right-handed alpha
Helix 21
AC3
B
87 89Right-handed 310
Helix 22
AC4
B
90 92Right-handed 310
Helix 23
AC5
B
101 117Right-handed alpha
Helix 24
AC6
B
131 140Right-handed alpha
Helix 25
AC7
B
159 169Right-handed alpha
Helix 26
AC8
B
191 206Right-handed alpha
Helix 27
AC9
B
222 227Right-handed alpha
Helix 28
AD1
B
227 235Right-handed alpha
Helix 29
AD2
B
252 255Right-handed 310
Helix 30
AD3
B
266 268Right-handed 310
Helix 31
AD4
B
269 282Right-handed alpha
Helix 32
AD5
B
289 302Right-handed alpha
Helix 33
AD6
B
302 335Right-handed alpha
Helix 34
AD7
B
340 346Right-handed alpha
Helix 35
AD8
B
356 366Right-handed alpha
Helix 36
AD9
B
382 400Right-handed alpha
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There are 8 sheets in PDB entry 6EZL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 32first strand
Strand 2
A
368 369parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 100first strand
Strand 2
A
257 263anti-parallel
Strand 3
A
240 245anti-parallel
Strand 4
A
208 213parallel
Strand 5
A
175 179parallel
Strand 6
A
123 127parallel
Strand 7
A
145 149parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
151 152first strand
Strand 2
A
157 158anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
350 352first strand
Strand 2
A
375 377anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
31 32first strand
Strand 2
B
368 369parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
94 100first strand
Strand 2
B
257 263anti-parallel
Strand 3
B
240 245anti-parallel
Strand 4
B
208 213parallel
Strand 5
B
175 179parallel
Strand 6
B
123 127parallel
Strand 7
B
145 149parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
151 152first strand
Strand 2
B
157 158anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
350 352first strand
Strand 2
B
375 377anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il