Analysis of interatomic Contacts of Structural Units in PDB entry:
6EZV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6EZV entry

There is 1 chain in PDB entry 6EZV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
X
THR 6VAL 365
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 6EZV. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
X
9 34Right-handed alpha
Helix 2
AA2
X
46 67Right-handed alpha
Helix 3
AA3
X
67 101Right-handed alpha
Helix 4
AA4
X
109 165Right-handed alpha
Helix 5
AA5
X
168 195Right-handed alpha
Helix 6
AA6
X
242 262Right-handed alpha
Helix 7
AA7
X
265 273Right-handed alpha
Helix 8
AA8
X
274 277Right-handed 310
Helix 9
AA9
X
278 318Right-handed alpha
Helix 10
AB1
X
321 327Right-handed alpha
Helix 11
AB2
X
328 331Right-handed 310
Helix 12
AB3
X
332 352Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6EZV.

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
X
36 37first strand
Strand 2
X
224 233anti-parallel
Strand 3
X
204 212anti-parallel
Strand 4
X
355 361parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il