Analysis of interatomic Contacts of Structural Units in PDB entry:
6F0P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6F0P entry

There is 1 chain in PDB entry 6F0P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 879ARG 1300
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 6F0P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
935 939Right-handed 310
Helix 2
AA2
A
960 964Right-handed 310
Helix 3
AA3
A
1086 1098Right-handed alpha
Helix 4
AA4
A
1216 1220Right-handed 310
Helix 5
AA5
A
1271 1278Right-handed alpha
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There are 7 sheets in PDB entry 6F0P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
895 896first strand
Strand 2
A
883 888anti-parallel
Strand 3
A
1072 1081anti-parallel
Strand 4
A
920 923anti-parallel
Strand 5
A
911 912anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
895 896first strand
Strand 2
A
883 888anti-parallel
Strand 3
A
1072 1081anti-parallel
Strand 4
A
947 954anti-parallel
Strand 5
A
1021 1027anti-parallel
Strand 6
A
1032 1037anti-parallel
Strand 7
A
1040 1046anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
903 906first strand
Strand 2
A
930 933anti-parallel
Strand 3
A
1058 1064anti-parallel
Strand 4
A
968 975anti-parallel
Strand 5
A
978 985anti-parallel
Strand 6
A
988 994anti-parallel
Strand 7
A
1000 1006anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
941 942first strand
Strand 2
A
1053 1054anti-parallel
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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1128 1132first strand
Strand 2
A
1139 1143anti-parallel
Strand 3
A
1264 1270anti-parallel
Strand 4
A
1252 1261anti-parallel
Strand 5
A
1243 1246anti-parallel
Strand 6
A
1226 1229anti-parallel
Strand 7
A
1185 1192anti-parallel
Strand 8
A
1195 1200anti-parallel
Strand 9
A
1213 1215anti-parallel
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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1210 1211first strand
Strand 2
A
1264 1270anti-parallel
Strand 3
A
1252 1261anti-parallel
Strand 4
A
1243 1246anti-parallel
Strand 5
A
1226 1229anti-parallel
Strand 6
A
1185 1192anti-parallel
Strand 7
A
1165 1170anti-parallel
Strand 8
A
1116 1121anti-parallel
Strand 9
A
1288 1291anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1148 1151first strand
Strand 2
A
1155 1158anti-parallel
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