Analysis of interatomic Contacts of Structural Units in PDB entry:
6F0X

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6F0X entry

There are 9 chains in PDB entry 6F0X (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 122	ALA 429
B	PRO 19	ALA 429
C	PRO 19	ALA 429
D	PRO 19	ALA 429
E	PRO 19	ALA 429
F	ALA 122	GLU 424
P	CYS 54	GLU 274
Q	LYS 129	PRO 137
Z	ALA 2	ASP 205

There are 97 helices in PDB entry 6F0X. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	129	133	Right-handed 310
Helix 2	AA2	A	144	161	Right-handed alpha
Helix 3	AA3	A	184	200	Right-handed alpha
Helix 4	AA4	A	213	218	Right-handed alpha
Helix 5	AA5	A	221	241	Right-handed alpha
Helix 6	AA6	A	253	257	Right-handed 310
Helix 7	AA7	A	273	289	Right-handed alpha
Helix 8	AA8	A	323	341	Right-handed alpha
Helix 9	AA9	A	352	359	Right-handed alpha
Helix 10	AB1	A	367	379	Right-handed alpha
Helix 11	AB2	A	384	398	Right-handed alpha
Helix 12	AB3	A	408	428	Right-handed alpha
Helix 13	AB4	B	34	50	Right-handed alpha
Helix 14	AB5	B	63	70	Right-handed alpha
Helix 15	AB6	B	129	133	Right-handed 310
Helix 16	AB7	B	134	139	Right-handed alpha
Helix 17	AB8	B	144	163	Right-handed alpha
Helix 18	AB9	B	184	200	Right-handed alpha
Helix 19	AC1	B	213	218	Right-handed 310
Helix 20	AC2	B	223	242	Right-handed alpha
Helix 21	AC3	B	255	257	Right-handed 310
Helix 22	AC4	B	258	262	Right-handed 310
Helix 23	AC5	B	267	288	Right-handed alpha
Helix 24	AC6	B	301	305	Right-handed 310
Helix 25	AC7	B	307	312	Right-handed alpha
Helix 26	AC8	B	323	341	Right-handed alpha
Helix 27	AC9	B	352	359	Right-handed alpha
Helix 28	AD1	B	367	379	Right-handed alpha
Helix 29	AD2	B	384	399	Right-handed alpha
Helix 30	AD3	B	406	429	Right-handed alpha
Helix 31	AD4	C	34	50	Right-handed alpha
Helix 32	AD5	C	63	70	Right-handed alpha
Helix 33	AD6	C	129	133	Right-handed 310
Helix 34	AD7	C	134	138	Right-handed 310
Helix 35	AD8	C	144	161	Right-handed alpha
Helix 36	AD9	C	184	200	Right-handed alpha
Helix 37	AE1	C	201	203	Right-handed 310
Helix 38	AE2	C	213	218	Right-handed alpha
Helix 39	AE3	C	223	242	Right-handed alpha
Helix 40	AE4	C	253	257	Right-handed 310
Helix 41	AE5	C	269	288	Right-handed alpha
Helix 42	AE6	C	301	305	Right-handed 310
Helix 43	AE7	C	306	313	Right-handed alpha
Helix 44	AE8	C	323	341	Right-handed alpha
Helix 45	AE9	C	352	359	Right-handed alpha
Helix 46	AF1	C	364	381	Right-handed alpha
Helix 47	AF2	C	384	399	Right-handed alpha
Helix 48	AF3	C	409	428	Right-handed alpha
Helix 49	AF4	D	34	50	Right-handed alpha
Helix 50	AF5	D	63	69	Right-handed alpha
Helix 51	AF6	D	144	159	Right-handed alpha
Helix 52	AF7	D	184	200	Right-handed alpha
Helix 53	AF8	D	214	217	Right-handed 310
Helix 54	AF9	D	223	242	Right-handed alpha
Helix 55	AG1	D	254	259	Right-handed alpha
Helix 56	AG2	D	267	288	Right-handed alpha
Helix 57	AG3	D	323	341	Right-handed alpha
Helix 58	AG4	D	352	359	Right-handed alpha
Helix 59	AG5	D	367	381	Right-handed alpha
Helix 60	AG6	D	384	400	Right-handed alpha
Helix 61	AG7	D	409	429	Right-handed alpha
Helix 62	AG8	E	34	50	Right-handed alpha
Helix 63	AG9	E	63	69	Right-handed alpha
Helix 64	AH1	E	129	133	Right-handed 310
Helix 65	AH2	E	134	139	Right-handed alpha
Helix 66	AH3	E	144	163	Right-handed alpha
Helix 67	AH4	E	184	201	Right-handed alpha
Helix 68	AH5	E	225	241	Right-handed alpha
Helix 69	AH6	E	253	257	Right-handed 310
Helix 70	AH7	E	270	287	Right-handed alpha
Helix 71	AH8	E	288	290	Right-handed 310
Helix 72	AH9	E	323	341	Right-handed alpha
Helix 73	AI1	E	352	359	Right-handed alpha
Helix 74	AI2	E	366	379	Right-handed alpha
Helix 75	AI3	E	384	389	Right-handed alpha
Helix 76	AI4	E	390	400	Right-handed alpha
Helix 77	AI5	E	409	428	Right-handed alpha
Helix 78	AI6	F	129	133	Right-handed 310
Helix 79	AI7	F	145	163	Right-handed alpha
Helix 80	AI8	F	184	200	Right-handed alpha
Helix 81	AI9	F	228	241	Right-handed alpha
Helix 82	AJ1	F	254	259	Right-handed 310
Helix 83	AJ2	F	273	288	Right-handed alpha
Helix 84	AJ3	F	306	311	Right-handed alpha
Helix 85	AJ4	F	323	339	Right-handed alpha
Helix 86	AJ5	F	352	359	Right-handed alpha
Helix 87	AJ6	F	367	379	Right-handed alpha
Helix 88	AJ7	F	384	399	Right-handed alpha
Helix 89	AJ8	F	406	424	Right-handed alpha
Helix 90	AJ9	P	67	84	Right-handed alpha
Helix 91	AK1	P	123	145	Right-handed alpha
Helix 92	AK2	P	182	197	Right-handed alpha
Helix 93	AK3	P	254	259	Right-handed alpha
Helix 94	AK4	Z	12	35	Right-handed alpha
Helix 95	AK5	Z	58	78	Right-handed alpha
Helix 96	AK6	Z	107	112	Right-handed 310
Helix 97	AK7	Z	120	139	Right-handed alpha

There are 20 sheets in PDB entry 6F0X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	123	126	first strand
Strand 2	A	206	211	anti-parallel
Strand 3	A	245	251	parallel
Strand 4	A	295	298	parallel
Strand 5	A	174	178	parallel
Strand 6	A	317	318	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	57	58	first strand
Strand 2	B	72	75	anti-parallel
Strand 3	B	23	27	anti-parallel
Strand 4	B	97	101	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	123	126	first strand
Strand 2	B	208	212	anti-parallel
Strand 3	B	247	253	parallel
Strand 4	B	293	299	parallel
Strand 5	B	174	178	parallel
Strand 6	B	315	318	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	20	22	first strand
Strand 2	C	94	96	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	25	27	first strand
Strand 2	C	99	101	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	57	58	first strand
Strand 2	C	73	74	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	122	126	first strand
Strand 2	C	208	212	anti-parallel
Strand 3	C	247	251	parallel
Strand 4	C	294	297	parallel
Strand 5	C	174	178	parallel
Strand 6	C	317	318	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	20	22	first strand
Strand 2	D	94	96	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	57	58	first strand
Strand 2	D	70	74	anti-parallel
Strand 3	D	24	27	anti-parallel
Strand 4	D	99	101	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	122	126	first strand
Strand 2	D	208	212	anti-parallel
Strand 3	D	247	250	parallel
Strand 4	D	293	297	parallel
Strand 5	D	174	178	parallel
Strand 6	D	315	318	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	26	27	first strand
Strand 2	E	70	72	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	123	126	first strand
Strand 2	E	206	211	anti-parallel
Strand 3	E	245	251	parallel
Strand 4	E	293	297	parallel
Strand 5	E	174	176	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	123	126	first strand
Strand 2	F	206	212	anti-parallel
Strand 3	F	249	251	parallel
Strand 4	F	295	297	parallel
Strand 5	F	174	175	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	123	126	first strand
Strand 2	F	206	212	anti-parallel
Strand 3	F	245	247	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	177	178	first strand
Strand 2	F	317	318	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	227	228	first strand
Strand 2	P	261	264	anti-parallel
Strand 3	P	210	217	anti-parallel
Strand 4	P	149	154	anti-parallel
Strand 5	P	163	168	anti-parallel
Strand 6	P	239	243	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	227	228	first strand
Strand 2	P	261	264	anti-parallel
Strand 3	P	210	217	anti-parallel
Strand 4	P	269	270	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	131	132	first strand
Strand 2	Z	168	169	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Z	44	48	first strand
Strand 2	Z	51	55	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Z	149	157	first strand
Strand 2	Z	81	90	anti-parallel
Strand 3	Z	96	105	anti-parallel
Strand 4	Z	192	200	anti-parallel
Strand 5	Z	178	182	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6F0X

Analysis of interatomic Contacts of Structural Units in PDB entry:
6F0X