Analysis of interatomic Contacts of Structural Units in PDB entry:
6F1V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6F1V entry

There are 2 chains in PDB entry 6F1V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
f
 ALA 517LEU 927
m
 ASN 453TRP 702
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 6F1V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
f
518 534Right-handed alpha
Helix 2
AA2
f
538 540Right-handed 310
Helix 3
AA3
f
541 575Right-handed alpha
Helix 4
AA4
f
577 588Right-handed alpha
Helix 5
AA5
f
589 594Right-handed 310
Helix 6
AA6
f
596 604Right-handed alpha
Helix 7
AA7
f
604 625Right-handed alpha
Helix 8
AA8
f
630 639Right-handed alpha
Helix 9
AA9
f
642 670Right-handed alpha
Helix 10
AB1
f
678 693Right-handed alpha
Helix 11
AB2
f
695 707Right-handed alpha
Helix 12
AB3
f
741 756Right-handed alpha
Helix 13
AB4
f
761 773Right-handed alpha
Helix 14
AB5
f
774 797Right-handed alpha
Helix 15
AB6
f
800 822Right-handed alpha
Helix 16
AB7
f
829 863Right-handed alpha
Helix 17
AB8
f
870 891Right-handed alpha
Helix 18
AB9
f
895 926Right-handed alpha
Helix 19
AC1
m
456 480Right-handed alpha
Helix 20
AC2
m
519 534Right-handed alpha
Helix 21
AC3
m
539 574Right-handed alpha
Helix 22
AC4
m
577 586Right-handed alpha
Helix 23
AC5
m
594 599Right-handed alpha
Helix 24
AC6
m
601 625Right-handed alpha
Helix 25
AC7
m
630 639Right-handed alpha
Helix 26
AC8
m
642 670Right-handed alpha
Helix 27
AC9
m
678 692Right-handed alpha
Helix 28
AD1
m
695 702Right-handed alpha
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There are no sheets in PDB entry 6F1V
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il