Analysis of interatomic Contacts of Structural Units in PDB entry:
6F2P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6F2P entry

There is 1 chain in PDB entry 6F2P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 1PRO 1040
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 6F2P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 19Right-handed alpha
Helix 2
AA2
A
27 47Right-handed alpha
Helix 3
AA3
A
67 86Right-handed alpha
Helix 4
AA4
A
94 112Right-handed alpha
Helix 5
AA5
A
122 128Right-handed alpha
Helix 6
AA6
A
128 142Right-handed alpha
Helix 7
AA7
A
143 145Right-handed 310
Helix 8
AA8
A
146 161Right-handed alpha
Helix 9
AA9
A
167 185Right-handed alpha
Helix 10
AB1
A
187 198Right-handed alpha
Helix 11
AB2
A
199 202Right-handed 310
Helix 12
AB3
A
228 245Right-handed alpha
Helix 13
AB4
A
255 267Right-handed alpha
Helix 14
AB5
A
278 290Right-handed 310
Helix 15
AB6
A
291 308Right-handed alpha
Helix 16
AB7
A
311 329Right-handed alpha
Helix 17
AB8
A
339 352Right-handed alpha
Helix 18
AB9
A
425 430Right-handed alpha
Helix 19
AC1
A
579 583Right-handed 310
Helix 20
AC2
A
624 634Right-handed alpha
Helix 21
AC3
A
771 773Right-handed 310
Helix 22
AC4
A
790 792Right-handed 310
Helix 23
AC5
A
901 906Right-handed alpha
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There are 14 sheets in PDB entry 6F2P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
210 211first strand
Strand 2
A
217 219anti-parallel
Strand 3
A
223 224anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
271 272first strand
Strand 2
A
275 276anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
363 367first strand
Strand 2
A
372 377anti-parallel
Strand 3
A
380 385anti-parallel
Strand 4
A
411 415anti-parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
439 441first strand
Strand 2
A
508 516anti-parallel
Strand 3
A
595 607anti-parallel
Strand 4
A
559 578anti-parallel
Strand 5
A
613 621anti-parallel
Strand 6
A
493 501anti-parallel
Strand 7
A
481 488anti-parallel
Strand 8
A
466 474anti-parallel
Strand 9
A
457 462anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
439 441first strand
Strand 2
A
508 516anti-parallel
Strand 3
A
595 607anti-parallel
Strand 4
A
559 578anti-parallel
Strand 5
A
539 550anti-parallel
Strand 6
A
525 527anti-parallel
Strand 7
A
530 531anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
637 642first strand
Strand 2
A
646 651anti-parallel
Strand 3
A
656 661anti-parallel
Strand 4
A
678 684anti-parallel
Strand 5
A
688 694anti-parallel
Strand 6
A
744 750anti-parallel
Strand 7
A
714 718anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
667 669first strand
Strand 2
A
672 674anti-parallel
Strand 3
A
703 708anti-parallel
Strand 4
A
731 736anti-parallel
Strand 5
A
722 726anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
768 769first strand
Strand 2
A
891 900anti-parallel
Strand 3
A
794 798anti-parallel
Strand 4
A
783 786anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
768 769first strand
Strand 2
A
891 900anti-parallel
Strand 3
A
817 826anti-parallel
Strand 4
A
857 867anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
775 778first strand
Strand 2
A
806 813anti-parallel
Strand 3
A
871 882anti-parallel
Strand 4
A
832 838anti-parallel
Strand 5
A
841 842anti-parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
775 778first strand
Strand 2
A
806 813anti-parallel
Strand 3
A
871 882anti-parallel
Strand 4
A
832 838anti-parallel
Strand 5
A
847 848anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
907 910first strand
Strand 2
A
1033 1039anti-parallel
Strand 3
A
960 967anti-parallel
Strand 4
A
1003 1010anti-parallel
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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
917 920first strand
Strand 2
A
949 952anti-parallel
Strand 3
A
1017 1021anti-parallel
Strand 4
A
978 984anti-parallel
Strand 5
A
987 993anti-parallel
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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
924 926first strand
Strand 2
A
937 939anti-parallel
Strand 3
A
1030 1031anti-parallel
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