Analysis of interatomic Contacts of Structural Units in PDB entry:
6F2S

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6F2S entry

There are 22 chains in PDB entry 6F2S (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 63	ASN 257
L	C 1	C 7
B	PRO 63	ASN 257
M	C 1	C 7
F	PRO 63	ASN 257
Q	C 1	C 7
E	PRO 63	ASN 257
P	C 1	C 7
D	PRO 63	ASN 257
O	C 1	C 7
C	PRO 63	ASN 257
N	C 1	C 7
K	PRO 63	ASN 257
V	C 1	C 7
J	PRO 63	ASN 257
U	C 1	C 7
I	ARG 55	ASN 257
T	C 1	C 7
H	ASN 40	ASN 257
S	C 1	A 6
G	PRO 63	ASN 257
R	C 1	C 7

There are 33 helices in PDB entry 6F2S. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	124	129	Right-handed alpha
Helix 2	AA2	A	152	156	Right-handed alpha
Helix 3	AA3	A	159	167	Right-handed 310
Helix 4	AA4	B	152	156	Right-handed alpha
Helix 5	AA5	B	159	167	Right-handed 310
Helix 6	AA6	B	219	221	Right-handed 310
Helix 7	AA7	F	124	129	Right-handed alpha
Helix 8	AA8	F	152	155	Right-handed 310
Helix 9	AA9	F	163	167	Right-handed 310
Helix 10	AB1	E	152	155	Right-handed 310
Helix 11	AB2	E	159	167	Right-handed 310
Helix 12	AB3	E	171	175	Right-handed 310
Helix 13	AB4	D	152	156	Right-handed alpha
Helix 14	AB5	D	163	167	Right-handed 310
Helix 15	AB6	D	171	175	Right-handed 310
Helix 16	AB7	C	152	155	Right-handed 310
Helix 17	AB8	C	159	167	Right-handed 310
Helix 18	AB9	K	124	129	Right-handed alpha
Helix 19	AC1	K	152	156	Right-handed alpha
Helix 20	AC2	K	159	167	Right-handed 310
Helix 21	AC3	J	152	155	Right-handed 310
Helix 22	AC4	J	159	167	Right-handed 310
Helix 23	AC5	J	171	175	Right-handed 310
Helix 24	AC6	I	152	156	Right-handed alpha
Helix 25	AC7	I	159	167	Right-handed 310
Helix 26	AC8	H	41	47	Right-handed alpha
Helix 27	AC9	H	54	60	Right-handed alpha
Helix 28	AD1	H	159	167	Right-handed 310
Helix 29	AD2	H	172	175	Right-handed 310
Helix 30	AD3	H	219	223	Right-handed 310
Helix 31	AD4	G	152	155	Right-handed 310
Helix 32	AD5	G	163	167	Right-handed 310
Helix 33	AD6	G	219	221	Right-handed 310

There are 39 sheets in PDB entry 6F2S. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	69	84	first strand
Strand 2	A	241	254	anti-parallel
Strand 3	A	110	122	anti-parallel
Strand 4	A	197	212	anti-parallel
Strand 5	A	223	225	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	89	91	first strand
Strand 2	A	227	232	anti-parallel
Strand 3	A	139	143	anti-parallel
Strand 4	A	177	182	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	132	136	first strand
Strand 2	A	185	189	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	157	158	first strand
Strand 2	A	168	169	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	69	84	first strand
Strand 2	B	241	254	anti-parallel
Strand 3	B	109	122	anti-parallel
Strand 4	B	197	212	anti-parallel
Strand 5	B	223	225	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	89	92	first strand
Strand 2	B	227	232	anti-parallel
Strand 3	B	139	143	anti-parallel
Strand 4	B	177	181	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	132	136	first strand
Strand 2	B	185	189	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	157	158	first strand
Strand 2	B	168	169	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	69	84	first strand
Strand 2	F	241	254	anti-parallel
Strand 3	F	109	122	anti-parallel
Strand 4	F	197	212	anti-parallel
Strand 5	F	223	224	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	89	92	first strand
Strand 2	F	227	234	anti-parallel
Strand 3	F	132	143	anti-parallel
Strand 4	F	177	189	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	157	158	first strand
Strand 2	F	168	169	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	74	84	first strand
Strand 2	E	241	253	anti-parallel
Strand 3	E	109	122	anti-parallel
Strand 4	E	197	212	anti-parallel
Strand 5	E	223	225	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	89	91	first strand
Strand 2	E	227	232	anti-parallel
Strand 3	E	138	143	anti-parallel
Strand 4	E	177	183	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	133	135	first strand
Strand 2	E	186	188	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	157	158	first strand
Strand 2	E	168	169	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	69	76	first strand
Strand 2	D	248	254	anti-parallel
Strand 3	D	109	122	anti-parallel
Strand 4	D	241	245	anti-parallel
Strand 5	D	80	84	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	69	76	first strand
Strand 2	D	248	254	anti-parallel
Strand 3	D	109	122	anti-parallel
Strand 4	D	197	212	anti-parallel
Strand 5	D	223	225	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	89	92	first strand
Strand 2	D	227	232	anti-parallel
Strand 3	D	138	143	anti-parallel
Strand 4	D	177	183	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	132	135	first strand
Strand 2	D	186	189	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	157	158	first strand
Strand 2	D	168	169	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	69	84	first strand
Strand 2	C	241	254	anti-parallel
Strand 3	C	109	122	anti-parallel
Strand 4	C	197	212	anti-parallel
Strand 5	C	223	225	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	89	91	first strand
Strand 2	C	227	232	anti-parallel
Strand 3	C	132	143	anti-parallel
Strand 4	C	177	189	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	157	158	first strand
Strand 2	C	168	169	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	69	84	first strand
Strand 2	K	241	254	anti-parallel
Strand 3	K	109	122	anti-parallel
Strand 4	K	197	212	anti-parallel
Strand 5	K	223	225	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	89	92	first strand
Strand 2	K	227	234	anti-parallel
Strand 3	K	133	143	anti-parallel
Strand 4	K	177	188	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	157	158	first strand
Strand 2	K	168	169	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	69	84	first strand
Strand 2	J	241	254	anti-parallel
Strand 3	J	109	122	anti-parallel
Strand 4	J	197	212	anti-parallel
Strand 5	J	223	225	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	89	92	first strand
Strand 2	J	227	234	anti-parallel
Strand 3	J	132	143	anti-parallel
Strand 4	J	177	183	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	89	92	first strand
Strand 2	J	227	234	anti-parallel
Strand 3	J	132	143	anti-parallel
Strand 4	J	186	189	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	157	158	first strand
Strand 2	J	168	169	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	69	84	first strand
Strand 2	I	241	254	anti-parallel
Strand 3	I	109	122	anti-parallel
Strand 4	I	197	211	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	89	92	first strand
Strand 2	I	227	232	anti-parallel
Strand 3	I	133	143	anti-parallel
Strand 4	I	177	188	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	157	158	first strand
Strand 2	I	168	169	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	70	84	first strand
Strand 2	H	241	253	anti-parallel
Strand 3	H	109	122	anti-parallel
Strand 4	H	197	211	anti-parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	89	92	first strand
Strand 2	H	227	234	anti-parallel
Strand 3	H	132	143	anti-parallel
Strand 4	H	177	189	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	157	158	first strand
Strand 2	H	168	169	anti-parallel

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There are 5 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	69	84	first strand
Strand 2	G	241	254	anti-parallel
Strand 3	G	109	122	anti-parallel
Strand 4	G	197	212	anti-parallel
Strand 5	G	223	225	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	89	92	first strand
Strand 2	G	227	234	anti-parallel
Strand 3	G	133	143	anti-parallel
Strand 4	G	177	188	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	157	158	first strand
Strand 2	G	168	169	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6F2S

Analysis of interatomic Contacts of Structural Units in PDB entry:
6F2S