Analysis of interatomic Contacts of Structural Units in PDB entry:
6F3H

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6F3H entry

There are 2 chains in PDB entry 6F3H (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 89	HIS 896
B	HIS 77	LEU 651

There are 51 helices in PDB entry 6F3H. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	94	100	Right-handed alpha
Helix 2	AA2	A	145	147	Right-handed 310
Helix 3	AA3	A	191	228	Right-handed alpha
Helix 4	AA4	A	238	247	Right-handed alpha
Helix 5	AA5	A	249	255	Right-handed alpha
Helix 6	AA6	A	261	269	Right-handed alpha
Helix 7	AA7	A	279	295	Right-handed alpha
Helix 8	AA8	A	322	350	Right-handed alpha
Helix 9	AA9	A	352	360	Right-handed alpha
Helix 10	AB1	A	360	372	Right-handed alpha
Helix 11	AB2	A	378	391	Right-handed alpha
Helix 12	AB3	A	401	412	Right-handed alpha
Helix 13	AB4	A	421	425	Right-handed 310
Helix 14	AB5	A	436	447	Right-handed alpha
Helix 15	AB6	A	499	507	Right-handed 310
Helix 16	AB7	A	516	525	Right-handed alpha
Helix 17	AB8	A	540	548	Right-handed alpha
Helix 18	AB9	A	576	580	Right-handed 310
Helix 19	AC1	A	594	603	Right-handed alpha
Helix 20	AC2	A	610	636	Right-handed alpha
Helix 21	AC3	A	670	694	Right-handed alpha
Helix 22	AC4	A	709	726	Right-handed alpha
Helix 23	AC5	A	730	739	Right-handed alpha
Helix 24	AC6	A	770	785	Right-handed alpha
Helix 25	AC7	A	792	830	Right-handed alpha
Helix 26	AC8	B	78	86	Right-handed alpha
Helix 27	AC9	B	94	100	Right-handed alpha
Helix 28	AD1	B	145	147	Right-handed 310
Helix 29	AD2	B	158	168	Right-handed alpha
Helix 30	AD3	B	190	228	Right-handed alpha
Helix 31	AD4	B	238	247	Right-handed alpha
Helix 32	AD5	B	249	254	Right-handed alpha
Helix 33	AD6	B	261	273	Right-handed alpha
Helix 34	AD7	B	279	295	Right-handed alpha
Helix 35	AD8	B	322	350	Right-handed alpha
Helix 36	AD9	B	352	360	Right-handed alpha
Helix 37	AE1	B	360	372	Right-handed alpha
Helix 38	AE2	B	378	391	Right-handed alpha
Helix 39	AE3	B	401	412	Right-handed alpha
Helix 40	AE4	B	421	425	Right-handed 310
Helix 41	AE5	B	436	447	Right-handed alpha
Helix 42	AE6	B	499	507	Right-handed 310
Helix 43	AE7	B	516	525	Right-handed alpha
Helix 44	AE8	B	540	548	Right-handed alpha
Helix 45	AE9	B	594	602	Right-handed alpha
Helix 46	AF1	B	610	636	Right-handed alpha
Helix 47	AF2	B	670	694	Right-handed alpha
Helix 48	AF3	B	709	723	Right-handed alpha
Helix 49	AF4	B	730	739	Right-handed alpha
Helix 50	AF5	B	770	785	Right-handed alpha
Helix 51	AF6	B	792	829	Right-handed alpha

There are 15 sheets in PDB entry 6F3H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	141	144	first strand
Strand 2	A	132	136	anti-parallel
Strand 3	A	118	122	anti-parallel
Strand 4	A	107	110	anti-parallel
Strand 5	A	149	153	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	234	237	first strand
Strand 2	A	311	316	anti-parallel
Strand 3	A	299	304	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	458	459	first strand
Strand 2	A	581	587	parallel
Strand 3	A	556	567	anti-parallel
Strand 4	A	489	497	anti-parallel
Strand 5	A	478	484	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	458	459	first strand
Strand 2	A	581	587	parallel
Strand 3	A	556	567	anti-parallel
Strand 4	A	573	574	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	529	530	first strand
Strand 2	A	535	536	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	648	652	first strand
Strand 2	A	661	665	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	700	702	first strand
Strand 2	A	745	747	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	833	838	first strand
Strand 2	A	846	850	anti-parallel
Strand 3	A	858	862	anti-parallel
Strand 4	A	891	895	parallel
Strand 5	A	876	886	anti-parallel
Strand 6	A	833	838	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	141	144	first strand
Strand 2	B	132	136	anti-parallel
Strand 3	B	118	122	anti-parallel
Strand 4	B	107	110	anti-parallel
Strand 5	B	149	153	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	234	237	first strand
Strand 2	B	310	316	anti-parallel
Strand 3	B	299	305	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	458	459	first strand
Strand 2	B	573	587	parallel
Strand 3	B	556	567	anti-parallel
Strand 4	B	489	497	anti-parallel
Strand 5	B	478	484	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	529	530	first strand
Strand 2	B	535	536	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	648	652	first strand
Strand 2	B	661	665	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	700	703	first strand
Strand 2	B	744	747	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	833	838	first strand
Strand 2	B	846	850	anti-parallel
Strand 3	B	858	862	anti-parallel
Strand 4	B	891	895	parallel
Strand 5	B	876	886	anti-parallel
Strand 6	B	833	838	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6F3H

Analysis of interatomic Contacts of Structural Units in PDB entry:
6F3H