Analysis of interatomic Contacts of Structural Units in PDB entry:
6F3K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6F3K entry

There is 1 chain in PDB entry 6F3K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ILE 353
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 6F3K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 18Right-handed alpha
Helix 2
AA2
A
24 26Right-handed 310
Helix 3
AA3
A
27 41Right-handed alpha
Helix 4
AA4
A
125 131Right-handed alpha
Helix 5
AA5
A
147 155Right-handed alpha
Helix 6
AA6
A
185 197Right-handed alpha
Helix 7
AA7
A
215 227Right-handed alpha
Helix 8
AA8
A
246 251Right-handed alpha
Helix 9
AA9
A
270 284Right-handed alpha
Helix 10
AB1
A
298 304Right-handed alpha
Helix 11
AB2
A
330 352Right-handed alpha
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There are 2 sheets in PDB entry 6F3K. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 46first strand
Strand 2
A
52 55anti-parallel
Strand 3
A
204 209anti-parallel
Strand 4
A
63 68parallel
Strand 5
A
231 234parallel
Strand 6
A
312 316parallel
Strand 7
A
259 263anti-parallel
Strand 8
A
289 292parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 76first strand
Strand 2
A
159 163anti-parallel
Strand 3
A
103 108anti-parallel
Strand 4
A
111 115anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il