Analysis of interatomic Contacts of Structural Units in PDB entry:
6F4A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6F4A entry

There are 3 chains in PDB entry 6F4A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 90LEU 892
B
 GLU 49TYR 685
C
 A 0 C 5
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 6F4A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
94 100Right-handed alpha
Helix 2
AA2
A
145 147Right-handed 310
Helix 3
AA3
A
195 228Right-handed alpha
Helix 4
AA4
A
238 247Right-handed alpha
Helix 5
AA5
A
258 272Right-handed alpha
Helix 6
AA6
A
279 295Right-handed alpha
Helix 7
AA7
A
318 350Right-handed alpha
Helix 8
AA8
A
352 360Right-handed alpha
Helix 9
AA9
A
360 372Right-handed alpha
Helix 10
AB1
A
378 391Right-handed alpha
Helix 11
AB2
A
401 411Right-handed alpha
Helix 12
AB3
A
421 425Right-handed 310
Helix 13
AB4
A
435 446Right-handed alpha
Helix 14
AB5
A
499 507Right-handed 310
Helix 15
AB6
A
516 525Right-handed alpha
Helix 16
AB7
A
540 548Right-handed alpha
Helix 17
AB8
A
594 600Right-handed alpha
Helix 18
AB9
A
613 636Right-handed alpha
Helix 19
AC1
A
670 694Right-handed alpha
Helix 20
AC2
A
711 721Right-handed alpha
Helix 21
AC3
A
733 739Right-handed alpha
Helix 22
AC4
A
770 785Right-handed alpha
Helix 23
AC5
A
792 829Right-handed alpha
Helix 24
AC6
B
50 66Right-handed alpha
Helix 25
AC7
B
73 95Right-handed alpha
Helix 26
AC8
B
98 103Right-handed alpha
Helix 27
AC9
B
120 126Right-handed alpha
Helix 28
AD1
B
148 167Right-handed alpha
Helix 29
AD2
B
187 191Right-handed 310
Helix 30
AD3
B
192 197Right-handed alpha
Helix 31
AD4
B
212 224Right-handed alpha
Helix 32
AD5
B
233 247Right-handed alpha
Helix 33
AD6
B
278 280Right-handed 310
Helix 34
AD7
B
293 299Right-handed 310
Helix 35
AD8
B
303 313Right-handed alpha
Helix 36
AD9
B
323 325Right-handed 310
Helix 37
AE1
B
326 338Right-handed alpha
Helix 38
AE2
B
377 391Right-handed alpha
Helix 39
AE3
B
403 416Right-handed alpha
Helix 40
AE4
B
425 430Right-handed 310
Helix 41
AE5
B
456 465Right-handed alpha
Helix 42
AE6
B
466 468Right-handed 310
Helix 43
AE7
B
489 502Right-handed alpha
Helix 44
AE8
B
515 524Right-handed alpha
Helix 45
AE9
B
535 545Right-handed alpha
Helix 46
AF1
B
556 563Right-handed alpha
Helix 47
AF2
B
574 580Right-handed alpha
Helix 48
AF3
B
590 604Right-handed alpha
Helix 49
AF4
B
633 652Right-handed alpha
Helix 50
AF5
B
658 679Right-handed alpha
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There are 8 sheets in PDB entry 6F4A. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
141 144first strand
Strand 2
A
132 136anti-parallel
Strand 3
A
117 122anti-parallel
Strand 4
A
107 110anti-parallel
Strand 5
A
149 153anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
234 237first strand
Strand 2
A
310 316anti-parallel
Strand 3
A
299 305anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
458 459first strand
Strand 2
A
585 587parallel
Strand 3
A
556 558anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
529 530first strand
Strand 2
A
535 536anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
700 702first strand
Strand 2
A
745 747anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
252 254first strand
Strand 2
B
273 276parallel
Strand 3
B
229 231parallel
Strand 4
B
288 291parallel
Strand 5
B
317 322parallel
Strand 6
B
201 206parallel
Strand 7
B
340 345parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
352 354first strand
Strand 2
B
483 487parallel
Strand 3
B
438 441parallel
Strand 4
B
370 373parallel
Strand 5
B
422 424parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
510 512first strand
Strand 2
B
551 553parallel
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