Analysis of interatomic Contacts of Structural Units in PDB entry:
6F5P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6F5P entry

There are 2 chains in PDB entry 6F5P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 1THR 708
D
MET 1PHE 525
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are183 helices in PDB entry 6F5P. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
4 13Right-handed alpha
Helix 2
AA2
A
14 28Right-handed alpha
Helix 3
AA3
A
34 50Right-handed alpha
Helix 4
AA4
A
68 83Right-handed alpha
Helix 5
AA5
A
111 124Right-handed alpha
Helix 6
AA6
A
125 127Right-handed 310
Helix 7
AA7
A
146 168Right-handed alpha
Helix 8
AA8
A
170 174Right-handed 310
Helix 9
AA9
A
175 180Right-handed alpha
Helix 10
AB1
A
181 183Right-handed 310
Helix 11
AB2
A
188 198Right-handed alpha
Helix 12
AB3
A
205 215Right-handed alpha
Helix 13
AB4
A
221 233Right-handed alpha
Helix 14
AB5
A
239 244Right-handed alpha
Helix 15
AB6
A
276 281Right-handed alpha
Helix 16
AB7
A
285 292Right-handed alpha
Helix 17
AB8
A
294 298Right-handed 310
Helix 18
AB9
A
309 327Right-handed alpha
Helix 19
AC1
A
332 344Right-handed alpha
Helix 20
AC2
A
354 361Right-handed alpha
Helix 21
AC3
A
380 391Right-handed alpha
Helix 22
AC4
A
411 428Right-handed alpha
Helix 23
AC5
A
429 452Right-handed alpha
Helix 24
AC6
A
558 566Right-handed alpha
Helix 25
AC7
A
568 590Right-handed alpha
Helix 26
AC8
A
593 601Right-handed alpha
Helix 27
AC9
A
620 634Right-handed alpha
Helix 28
AD1
A
636 658Right-handed alpha
Helix 29
AD2
A
666 677Right-handed alpha
Helix 30
AD3
A
681 702Right-handed alpha
Helix 31
AD4
D
4 13Right-handed alpha
Helix 32
AD5
D
14 28Right-handed alpha
Helix 33
AD6
D
34 51Right-handed alpha
Helix 34
AD7
D
68 83Right-handed alpha
Helix 35
AD8
D
111 124Right-handed alpha
Helix 36
AD9
D
125 127Right-handed 310
Helix 37
AE1
D
146 168Right-handed alpha
Helix 38
AE2
D
170 174Right-handed 310
Helix 39
AE3
D
175 180Right-handed alpha
Helix 40
AE4
D
188 198Right-handed alpha
Helix 41
AE5
D
205 215Right-handed alpha
Helix 42
AE6
D
221 233Right-handed alpha
Helix 43
AE7
D
239 244Right-handed alpha
Helix 44
AE8
D
276 281Right-handed alpha
Helix 45
AE9
D
285 292Right-handed alpha
Helix 46
AF1
D
294 298Right-handed 310
Helix 47
AF2
D
309 327Right-handed alpha
Helix 48
AF3
D
332 344Right-handed alpha
Helix 49
AF4
D
354 361Right-handed alpha
Helix 50
AF5
D
380 391Right-handed alpha
Helix 51
AF6
D
411 428Right-handed alpha
Helix 52
AF7
D
429 452Right-handed alpha
Helix 53
AF8
D
558 566Right-handed alpha
Helix 54
AF9
D
568 590Right-handed alpha
Helix 55
AG1
D
593 601Right-handed alpha
Helix 56
AG2
D
620 634Right-handed alpha
Helix 57
AG3
D
636 658Right-handed alpha
Helix 58
AG4
D
666 677Right-handed alpha
Helix 59
AG5
D
681 702Right-handed alpha
Helix 60
AG6
B
5 10Right-handed 310
Helix 61
AG7
B
13 18Right-handed alpha
Helix 62
AG8
B
19 21Right-handed 310
Helix 63
AG9
B
35 50Right-handed alpha
Helix 64
AH1
B
86 101Right-handed alpha
Helix 65
AH2
B
104 120Right-handed alpha
Helix 66
AH3
B
121 127Right-handed 310
Helix 67
AH4
B
142 158Right-handed alpha
Helix 68
AH5
B
164 176Right-handed alpha
Helix 69
AH6
B
216 224Right-handed alpha
Helix 70
AH7
B
250 268Right-handed alpha
Helix 71
AH8
B
277 295Right-handed alpha
Helix 72
AH9
B
310 315Right-handed alpha
Helix 73
AI1
B
316 328Right-handed alpha
Helix 74
AI2
B
332 348Right-handed alpha
Helix 75
AI3
B
374 379Right-handed alpha
Helix 76
AI4
B
380 382Right-handed 310
Helix 77
AI5
B
383 394Right-handed alpha
Helix 78
AI6
B
413 426Right-handed alpha
Helix 79
AI7
B
456 475Right-handed alpha
Helix 80
AI8
B
509 514Right-handed 310
Helix 81
AI9
B
519 537Right-handed alpha
Helix 82
AJ1
B
541 561Right-handed alpha
Helix 83
AJ2
B
571 581Right-handed alpha
Helix 84
AJ3
B
591 595Right-handed 310
Helix 85
AJ4
B
608 615Right-handed alpha
Helix 86
AJ5
B
618 626Right-handed alpha
Helix 87
AJ6
B
673 696Right-handed alpha
Helix 88
AJ7
B
709 728Right-handed alpha
Helix 89
AJ8
B
732 753Right-handed alpha
Helix 90
AJ9
C
5 10Right-handed 310
Helix 91
AK1
C
13 18Right-handed alpha
Helix 92
AK2
C
19 21Right-handed 310
Helix 93
AK3
C
35 50Right-handed alpha
Helix 94
AK4
C
86 101Right-handed alpha
Helix 95
AK5
C
104 120Right-handed alpha
Helix 96
AK6
C
121 127Right-handed 310
Helix 97
AK7
C
142 158Right-handed alpha
Helix 98
AK8
C
164 176Right-handed alpha
Helix 99
AK9
C
216 224Right-handed alpha
Helix 100
AL1
C
250 268Right-handed alpha
Helix 101
AL2
C
277 295Right-handed alpha
Helix 102
AL3
C
310 315Right-handed alpha
Helix 103
AL4
C
316 328Right-handed alpha
Helix 104
AL5
C
332 348Right-handed alpha
Helix 105
AL6
C
374 379Right-handed alpha
Helix 106
AL7
C
380 382Right-handed 310
Helix 107
AL8
C
383 394Right-handed alpha
Helix 108
AL9
C
413 426Right-handed alpha
Helix 109
AM1
C
456 475Right-handed alpha
Helix 110
AM2
C
509 514Right-handed 310
Helix 111
AM3
C
519 537Right-handed alpha
Helix 112
AM4
C
541 561Right-handed alpha
Helix 113
AM5
C
571 581Right-handed alpha
Helix 114
AM6
C
591 595Right-handed 310
Helix 115
AM7
C
608 615Right-handed alpha
Helix 116
AM8
C
618 626Right-handed alpha
Helix 117
AM9
C
673 696Right-handed alpha
Helix 118
AN1
C
709 728Right-handed alpha
Helix 119
AN2
C
732 753Right-handed alpha
Helix 120
AN3
E
2 17Right-handed alpha
Helix 121
AN4
E
17 26Right-handed alpha
Helix 122
AN5
E
30 37Right-handed alpha
Helix 123
AN6
E
48 57Right-handed alpha
Helix 124
AN7
E
65 72Right-handed alpha
Helix 125
AN8
E
99 109Right-handed alpha
Helix 126
AN9
E
114 120Right-handed alpha
Helix 127
AO1
E
122 134Right-handed alpha
Helix 128
AO2
E
162 175Right-handed alpha
Helix 129
AO3
E
182 190Right-handed alpha
Helix 130
AO4
E
191 202Right-handed alpha
Helix 131
AO5
E
206 218Right-handed alpha
Helix 132
AO6
E
232 238Right-handed alpha
Helix 133
AO7
E
258 280Right-handed alpha
Helix 134
AO8
E
284 295Right-handed alpha
Helix 135
AO9
E
306 313Right-handed alpha
Helix 136
AP1
E
317 326Right-handed alpha
Helix 137
AP2
E
402 418Right-handed alpha
Helix 138
AP3
E
420 425Right-handed alpha
Helix 139
AP4
E
444 456Right-handed alpha
Helix 140
AP5
E
457 467Right-handed alpha
Helix 141
AP6
E
558 575Right-handed alpha
Helix 142
AP7
E
581 588Right-handed alpha
Helix 143
AP8
E
591 596Right-handed alpha
Helix 144
AP9
E
597 604Right-handed alpha
Helix 145
AQ1
E
605 607Right-handed 310
Helix 146
AQ2
E
611 626Right-handed alpha
Helix 147
AQ3
E
633 641Right-handed alpha
Helix 148
AQ4
E
642 646Right-handed 310
Helix 149
AQ5
E
698 705Right-handed 310
Helix 150
AQ6
E
725 729Right-handed 310
Helix 151
AQ7
E
760 771Right-handed alpha
Helix 152
AQ8
F
2 17Right-handed alpha
Helix 153
AQ9
F
17 26Right-handed alpha
Helix 154
AR1
F
30 37Right-handed alpha
Helix 155
AR2
F
48 57Right-handed alpha
Helix 156
AR3
F
65 72Right-handed alpha
Helix 157
AR4
F
99 109Right-handed alpha
Helix 158
AR5
F
114 120Right-handed alpha
Helix 159
AR6
F
122 134Right-handed alpha
Helix 160
AR7
F
162 175Right-handed alpha
Helix 161
AR8
F
182 190Right-handed alpha
Helix 162
AR9
F
191 202Right-handed alpha
Helix 163
AS1
F
206 218Right-handed alpha
Helix 164
AS2
F
232 238Right-handed alpha
Helix 165
AS3
F
258 280Right-handed alpha
Helix 166
AS4
F
284 295Right-handed alpha
Helix 167
AS5
F
306 313Right-handed alpha
Helix 168
AS6
F
317 326Right-handed alpha
Helix 169
AS7
F
402 418Right-handed alpha
Helix 170
AS8
F
420 425Right-handed alpha
Helix 171
AS9
F
444 456Right-handed alpha
Helix 172
AT1
F
457 467Right-handed alpha
Helix 173
AT2
F
558 575Right-handed alpha
Helix 174
AT3
F
581 589Right-handed alpha
Helix 175
AT4
F
591 596Right-handed alpha
Helix 176
AT5
F
597 604Right-handed alpha
Helix 177
AT6
F
605 607Right-handed 310
Helix 178
AT7
F
611 626Right-handed alpha
Helix 179
AT8
F
633 641Right-handed alpha
Helix 180
AT9
F
642 646Right-handed 310
Helix 181
AU1
F
698 705Right-handed 310
Helix 182
AU2
F
725 729Right-handed 310
Helix 183
AU3
F
760 771Right-handed alpha
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There are 42 sheets in PDB entry 6F5P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
61 63first strand
Strand 2
A
94 96anti-parallel
Strand 3
A
102 108anti-parallel
Strand 4
A
128 133parallel
Strand 5
A
138 140anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
271 274first strand
Strand 2
A
480 490anti-parallel
Strand 3
A
457 466anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
271 274first strand
Strand 2
A
480 490anti-parallel
Strand 3
A
501 510anti-parallel
Strand 4
A
544 557anti-parallel
Strand 5
A
523 531anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
348 349first strand
Strand 2
B
366 369parallel
Strand 3
B
358 360anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
611 616first strand
Strand 2
A
602 608anti-parallel
Strand 3
B
2 3anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
663 664first strand
Strand 2
B
484 486anti-parallel
Strand 3
B
300 306anti-parallel
Strand 4
B
447 454anti-parallel
Strand 5
B
438 444anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
61 63first strand
Strand 2
D
94 96anti-parallel
Strand 3
D
102 108anti-parallel
Strand 4
D
128 133parallel
Strand 5
D
138 140anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
271 274first strand
Strand 2
D
480 490anti-parallel
Strand 3
D
457 466anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
271 274first strand
Strand 2
D
480 490anti-parallel
Strand 3
D
501 510anti-parallel
Strand 4
D
544 557anti-parallel
Strand 5
D
523 531anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
348 349first strand
Strand 2
C
366 369parallel
Strand 3
C
358 360anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
611 616first strand
Strand 2
D
602 608anti-parallel
Strand 3
C
2 3anti-parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
663 664first strand
Strand 2
C
484 486anti-parallel
Strand 3
C
300 306anti-parallel
Strand 4
C
447 454anti-parallel
Strand 5
C
438 444anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
56 57first strand
Strand 2
B
64 65anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
130 133first strand
Strand 2
B
138 141anti-parallel
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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
180 190first strand
Strand 2
B
205 215anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
243 246first strand
Strand 2
B
225 229anti-parallel
Strand 3
B
350 352parallel
Strand 4
B
401 403anti-parallel
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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
491 493first strand
Strand 2
B
496 498anti-parallel
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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
663 664first strand
Strand 2
E
61 62anti-parallel
Strand 3
E
96 97anti-parallel
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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
56 57first strand
Strand 2
C
64 65anti-parallel
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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
130 133first strand
Strand 2
C
138 141anti-parallel
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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
180 190first strand
Strand 2
C
205 215anti-parallel
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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
243 246first strand
Strand 2
C
225 229anti-parallel
Strand 3
C
350 352parallel
Strand 4
C
401 403anti-parallel
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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
491 493first strand
Strand 2
C
496 498anti-parallel
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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
663 664first strand
Strand 2
F
61 62anti-parallel
Strand 3
F
96 97anti-parallel
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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
147 154first strand
Strand 2
E
221 227anti-parallel
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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
302 305first strand
Strand 2
E
296 299anti-parallel
Strand 3
E
546 547anti-parallel
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There are 6 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
335 337first strand
Strand 2
E
340 344anti-parallel
Strand 3
E
372 379anti-parallel
Strand 4
E
382 389anti-parallel
Strand 5
E
392 398anti-parallel
Strand 6
E
497 498parallel
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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
350 357first strand
Strand 2
E
363 370anti-parallel
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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
435 436first strand
Strand 2
E
441 442anti-parallel
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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
469 470first strand
Strand 2
E
492 493anti-parallel
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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
516 517first strand
Strand 2
E
521 522anti-parallel
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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
675 676first strand
Strand 2
E
683 685anti-parallel
Strand 3
E
688 689anti-parallel
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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
713 714first strand
Strand 2
E
746 751anti-parallel
Strand 3
E
738 742anti-parallel
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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
147 154first strand
Strand 2
F
221 227anti-parallel
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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
302 305first strand
Strand 2
F
296 299anti-parallel
Strand 3
F
546 547anti-parallel
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There are 6 strands in AD9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
335 337first strand
Strand 2
F
340 344anti-parallel
Strand 3
F
372 379anti-parallel
Strand 4
F
382 389anti-parallel
Strand 5
F
392 398anti-parallel
Strand 6
F
497 498parallel
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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
351 357first strand
Strand 2
F
363 369anti-parallel
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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
435 436first strand
Strand 2
F
441 442anti-parallel
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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
469 470first strand
Strand 2
F
492 493anti-parallel
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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
516 517first strand
Strand 2
F
521 522anti-parallel
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There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
675 676first strand
Strand 2
F
683 685anti-parallel
Strand 3
F
688 689anti-parallel
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There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
713 714first strand
Strand 2
F
746 751anti-parallel
Strand 3
F
738 742anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il