Analysis of interatomic Contacts of Structural Units in PDB entry:
6F6W

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6F6W entry

There are 5 chains in PDB entry 6F6W (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	LEU 221
B	MET 1	GLU 233
C	ASN 21	GLU 1137
D	VAL 4	ALA 1283
E	SER 24	GLY 106

There are 94 helices in PDB entry 6F6W. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	30	45	Right-handed alpha
Helix 2	AA2	A	72	81	Right-handed alpha
Helix 3	AA3	A	108	110	Right-handed 310
Helix 4	AA4	A	203	219	Right-handed alpha
Helix 5	AA5	B	29	45	Right-handed alpha
Helix 6	AA6	B	72	82	Right-handed alpha
Helix 7	AA7	B	108	110	Right-handed 310
Helix 8	AA8	B	203	225	Right-handed alpha
Helix 9	AA9	C	45	57	Right-handed alpha
Helix 10	AB1	C	58	68	Right-handed alpha
Helix 11	AB2	C	75	85	Right-handed alpha
Helix 12	AB3	C	109	117	Right-handed alpha
Helix 13	AB4	C	224	234	Right-handed alpha
Helix 14	AB5	C	235	244	Right-handed alpha
Helix 15	AB6	C	247	256	Right-handed alpha
Helix 16	AB7	C	260	273	Right-handed alpha
Helix 17	AB8	C	279	290	Right-handed alpha
Helix 18	AB9	C	300	312	Right-handed alpha
Helix 19	AC1	C	326	342	Right-handed alpha
Helix 20	AC2	C	371	398	Right-handed alpha
Helix 21	AC3	C	404	409	Right-handed alpha
Helix 22	AC4	C	411	422	Right-handed alpha
Helix 23	AC5	C	435	443	Right-handed alpha
Helix 24	AC6	C	460	465	Right-handed alpha
Helix 25	AC7	C	524	530	Right-handed alpha
Helix 26	AC8	C	581	585	Right-handed 310
Helix 27	AC9	C	587	591	Right-handed 310
Helix 28	AD1	C	592	604	Right-handed alpha
Helix 29	AD2	C	620	630	Right-handed alpha
Helix 30	AD3	C	730	736	Right-handed alpha
Helix 31	AD4	C	769	773	Right-handed 310
Helix 32	AD5	C	919	933	Right-handed alpha
Helix 33	AD6	C	944	948	Right-handed 310
Helix 34	AD7	C	972	980	Right-handed alpha
Helix 35	AD8	C	1027	1032	Right-handed alpha
Helix 36	AD9	C	1060	1071	Right-handed alpha
Helix 37	AE1	C	1072	1080	Right-handed alpha
Helix 38	AE2	C	1086	1100	Right-handed alpha
Helix 39	AE3	C	1109	1122	Right-handed alpha
Helix 40	AE4	D	16	24	Right-handed alpha
Helix 41	AE5	D	84	90	Right-handed 310
Helix 42	AE6	D	112	119	Right-handed alpha
Helix 43	AE7	D	121	130	Right-handed alpha
Helix 44	AE8	D	140	147	Right-handed alpha
Helix 45	AE9	D	148	185	Right-handed alpha
Helix 46	AF1	D	193	228	Right-handed alpha
Helix 47	AF2	D	238	247	Right-handed alpha
Helix 48	AF3	D	258	267	Right-handed alpha
Helix 49	AF4	D	269	284	Right-handed alpha
Helix 50	AF5	D	287	305	Right-handed alpha
Helix 51	AF6	D	308	311	Right-handed 310
Helix 52	AF7	D	321	325	Right-handed 310
Helix 53	AF8	D	339	361	Right-handed alpha
Helix 54	AF9	D	363	383	Right-handed alpha
Helix 55	AG1	D	402	406	Right-handed 310
Helix 56	AG2	D	414	419	Right-handed alpha
Helix 57	AG3	D	445	452	Right-handed alpha
Helix 58	AG4	D	452	463	Right-handed alpha
Helix 59	AG5	D	468	479	Right-handed alpha
Helix 60	AG6	D	482	492	Right-handed alpha
Helix 61	AG7	D	505	507	Right-handed 310
Helix 62	AG8	D	528	533	Right-handed alpha
Helix 63	AG9	D	548	558	Right-handed alpha
Helix 64	AH1	D	579	590	Right-handed alpha
Helix 65	AH2	D	614	624	Right-handed alpha
Helix 66	AH3	D	643	651	Right-handed alpha
Helix 67	AH4	D	666	674	Right-handed alpha
Helix 68	AH5	D	688	703	Right-handed alpha
Helix 69	AH6	D	704	725	Right-handed alpha
Helix 70	AH7	D	740	762	Right-handed alpha
Helix 71	AH8	D	765	792	Right-handed alpha
Helix 72	AH9	D	796	804	Right-handed alpha
Helix 73	AI1	D	809	817	Right-handed alpha
Helix 74	AI2	D	844	880	Right-handed alpha
Helix 75	AI3	D	914	919	Right-handed alpha
Helix 76	AI4	D	944	955	Right-handed alpha
Helix 77	AI5	D	975	979	Right-handed alpha
Helix 78	AI6	D	993	1004	Right-handed alpha
Helix 79	AI7	D	1005	1009	Right-handed 310
Helix 80	AI8	D	1028	1037	Right-handed alpha
Helix 81	AI9	D	1082	1086	Right-handed 310
Helix 82	AJ1	D	1118	1146	Right-handed alpha
Helix 83	AJ2	D	1151	1163	Right-handed alpha
Helix 84	AJ3	D	1184	1192	Right-handed alpha
Helix 85	AJ4	D	1210	1217	Right-handed alpha
Helix 86	AJ5	D	1220	1228	Right-handed alpha
Helix 87	AJ6	D	1229	1241	Right-handed alpha
Helix 88	AJ7	D	1249	1256	Right-handed alpha
Helix 89	AJ8	D	1265	1270	Right-handed alpha
Helix 90	AJ9	D	1276	1283	Right-handed alpha
Helix 91	AK1	E	30	34	Right-handed 310
Helix 92	AK2	E	37	42	Right-handed alpha
Helix 93	AK3	E	46	66	Right-handed alpha
Helix 94	AK4	E	87	99	Right-handed alpha

There are 35 sheets in PDB entry 6F6W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	8	11	first strand
Strand 2	A	18	24	anti-parallel
Strand 3	A	191	198	anti-parallel
Strand 4	A	171	179	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	93	100	first strand
Strand 2	A	133	146	anti-parallel
Strand 3	A	47	56	anti-parallel
Strand 4	A	162	163	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	93	100	first strand
Strand 2	A	133	146	anti-parallel
Strand 3	A	167	168	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	85	87	first strand
Strand 2	A	116	118	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	103	106	first strand
Strand 2	A	124	128	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	9	13	first strand
Strand 2	B	18	26	anti-parallel
Strand 3	B	190	198	anti-parallel
Strand 4	B	171	180	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	93	100	first strand
Strand 2	B	133	144	anti-parallel
Strand 3	B	47	56	anti-parallel
Strand 4	B	161	163	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	103	106	first strand
Strand 2	B	124	128	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	146	147	first strand
Strand 2	B	166	167	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	30	31	first strand
Strand 2	C	963	964	parallel
Strand 3	C	617	618	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	87	88	first strand
Strand 2	C	94	99	anti-parallel
Strand 3	C	121	132	anti-parallel
Strand 4	C	137	149	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	157	159	first strand
Strand 2	C	162	166	anti-parallel
Strand 3	C	428	430	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	367	370	first strand
Strand 2	C	168	172	anti-parallel
Strand 3	C	445	447	parallel
Strand 4	C	488	490	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	175	182	first strand
Strand 2	C	189	196	anti-parallel
Strand 3	C	203	205	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	496	497	first strand
Strand 2	C	503	511	anti-parallel
Strand 3	C	514	523	anti-parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	496	497	first strand
Strand 2	C	503	511	anti-parallel
Strand 3	C	569	571	anti-parallel
Strand 4	C	532	533	parallel
Strand 5	C	549	553	anti-parallel
Strand 6	C	559	563	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	633	634	first strand
Strand 2	C	692	695	anti-parallel
Strand 3	C	678	679	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	658	662	first strand
Strand 2	C	648	653	anti-parallel
Strand 3	C	639	644	anti-parallel
Strand 4	C	686	687	anti-parallel

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There are 7 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	708	714	first strand
Strand 2	C	906	908	parallel
Strand 3	C	725	729	anti-parallel
Strand 4	C	883	890	parallel
Strand 5	C	875	877	anti-parallel
Strand 6	C	1015	1023	anti-parallel
Strand 7	C	708	714	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	740	749	first strand
Strand 2	C	858	868	anti-parallel
Strand 3	C	837	845	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	759	760	first strand
Strand 2	C	796	798	anti-parallel
Strand 3	C	824	825	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	792	794	first strand
Strand 2	C	828	829	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	935	936	first strand
Strand 2	C	956	957	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1057	1059	first strand
Strand 2	D	420	422	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1127	1129	first strand
Strand 2	D	9	11	anti-parallel
Strand 3	D	1243	1244	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	93	102	first strand
Strand 2	D	313	319	anti-parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	233	235	first strand
Strand 2	D	134	139	anti-parallel
Strand 3	D	252	255	anti-parallel

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There are 7 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	425	432	first strand
Strand 2	D	521	524	parallel
Strand 3	D	440	444	anti-parallel
Strand 4	D	509	517	parallel
Strand 5	D	496	499	anti-parallel
Strand 6	D	540	544	anti-parallel
Strand 7	D	425	432	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	611	612	first strand
Strand 2	D	634	637	parallel
Strand 3	D	661	664	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	885	887	first strand
Strand 2	D	973	974	parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	896	898	first strand
Strand 2	D	959	961	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1044	1045	first strand
Strand 2	D	1116	1117	parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1076	1077	first strand
Strand 2	D	1062	1069	anti-parallel
Strand 3	D	1052	1059	anti-parallel
Strand 4	D	1104	1106	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1182	1183	first strand
Strand 2	D	1165	1170	anti-parallel
Strand 3	D	1203	1206	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1272	1275	first strand
Strand 2	E	101	104	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6F6W

Analysis of interatomic Contacts of Structural Units in PDB entry:
6F6W