Analysis of interatomic Contacts of Structural Units in PDB entry:
6F71


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6F71 entry

There are 4 chains in PDB entry 6F71 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 3LEU 242
B
 ALA 3LEU 242
C
 SER 2LYS 243
D
 GLN 4LYS 243
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 53 helices in PDB entry 6F71. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 28Right-handed alpha
Helix 2
AA2
A
43 50Right-handed alpha
Helix 3
AA3
A
82 94Right-handed alpha
Helix 4
AA4
A
95 98Right-handed 310
Helix 5
AA5
A
103 120Right-handed alpha
Helix 6
AA6
A
120 130Right-handed alpha
Helix 7
AA7
A
134 148Right-handed alpha
Helix 8
AA8
A
162 181Right-handed alpha
Helix 9
AA9
A
189 199Right-handed alpha
Helix 10
AB1
A
200 202Right-handed 310
Helix 11
AB2
A
203 215Right-handed alpha
Helix 12
AB3
A
216 221Right-handed alpha
Helix 13
AB4
A
224 242Right-handed alpha
Helix 14
AB5
B
15 28Right-handed alpha
Helix 15
AB6
B
40 45Right-handed alpha
Helix 16
AB7
B
82 94Right-handed alpha
Helix 17
AB8
B
95 98Right-handed 310
Helix 18
AB9
B
103 120Right-handed alpha
Helix 19
AC1
B
120 130Right-handed alpha
Helix 20
AC2
B
134 149Right-handed alpha
Helix 21
AC3
B
162 181Right-handed alpha
Helix 22
AC4
B
189 199Right-handed alpha
Helix 23
AC5
B
200 202Right-handed 310
Helix 24
AC6
B
203 216Right-handed alpha
Helix 25
AC7
B
216 221Right-handed alpha
Helix 26
AC8
B
224 242Right-handed alpha
Helix 27
AC9
C
2 5Right-handed 310
Helix 28
AD1
C
15 28Right-handed alpha
Helix 29
AD2
C
43 50Right-handed alpha
Helix 30
AD3
C
82 94Right-handed alpha
Helix 31
AD4
C
95 98Right-handed 310
Helix 32
AD5
C
103 120Right-handed alpha
Helix 33
AD6
C
120 130Right-handed alpha
Helix 34
AD7
C
134 148Right-handed alpha
Helix 35
AD8
C
162 182Right-handed alpha
Helix 36
AD9
C
189 200Right-handed alpha
Helix 37
AE1
C
203 215Right-handed alpha
Helix 38
AE2
C
216 221Right-handed alpha
Helix 39
AE3
C
224 242Right-handed alpha
Helix 40
AE4
D
15 28Right-handed alpha
Helix 41
AE5
D
38 45Right-handed alpha
Helix 42
AE6
D
45 50Right-handed alpha
Helix 43
AE7
D
82 94Right-handed alpha
Helix 44
AE8
D
95 98Right-handed 310
Helix 45
AE9
D
103 120Right-handed alpha
Helix 46
AF1
D
120 132Right-handed alpha
Helix 47
AF2
D
134 149Right-handed alpha
Helix 48
AF3
D
162 182Right-handed alpha
Helix 49
AF4
D
189 199Right-handed alpha
Helix 50
AF5
D
200 202Right-handed 310
Helix 51
AF6
D
203 215Right-handed alpha
Helix 52
AF7
D
216 221Right-handed alpha
Helix 53
AF8
D
224 242Right-handed alpha
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There are 4 sheets in PDB entry 6F71. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 36first strand
Strand 2
A
7 11parallel
Strand 3
A
59 62anti-parallel
Strand 4
A
78 81anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
33 36first strand
Strand 2
B
7 11parallel
Strand 3
B
59 62anti-parallel
Strand 4
B
78 81anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
33 36first strand
Strand 2
C
7 11parallel
Strand 3
C
59 62anti-parallel
Strand 4
C
78 81anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
33 36first strand
Strand 2
D
7 11parallel
Strand 3
D
59 62anti-parallel
Strand 4
D
78 81anti-parallel
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