Analysis of interatomic Contacts of Structural Units in PDB entry:
6F72


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6F72 entry

There is 1 chain in PDB entry 6F72 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 27ALA 574
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 6F72. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
39 50Right-handed alpha
Helix 2
AA2
A
59 65Right-handed 310
Helix 3
AA3
A
73 82Right-handed alpha
Helix 4
AA4
A
88 93Right-handed alpha
Helix 5
AA5
A
100 105Right-handed alpha
Helix 6
AA6
A
132 147Right-handed alpha
Helix 7
AA7
A
202 213Right-handed alpha
Helix 8
AA8
A
229 234Right-handed alpha
Helix 9
AA9
A
240 245Right-handed alpha
Helix 10
AB1
A
246 249Right-handed 310
Helix 11
AB2
A
271 279Right-handed alpha
Helix 12
AB3
A
315 336Right-handed alpha
Helix 13
AB4
A
359 377Right-handed alpha
Helix 14
AB5
A
390 400Right-handed alpha
Helix 15
AB6
A
420 425Right-handed alpha
Helix 16
AB7
A
425 440Right-handed alpha
Helix 17
AB8
A
467 471Right-handed alpha
Helix 18
AB9
A
487 501Right-handed alpha
Helix 19
AC1
A
501 509Right-handed alpha
Helix 20
AC2
A
526 533Right-handed alpha
Helix 21
AC3
A
535 547Right-handed alpha
Helix 22
AC4
A
559 561Right-handed 310
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There are 6 sheets in PDB entry 6F72. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 56first strand
Strand 2
A
126 129anti-parallel
Strand 3
A
169 172parallel
Strand 4
A
150 153parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
179 186first strand
Strand 2
A
191 198anti-parallel
Strand 3
A
288 295anti-parallel
Strand 4
A
251 257anti-parallel
Strand 5
A
263 266anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
215 216first strand
Strand 2
A
297 298anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
382 388first strand
Strand 2
A
302 310anti-parallel
Strand 3
A
348 356anti-parallel
Strand 4
A
339 344anti-parallel
Strand 5
A
448 452anti-parallel
Strand 6
A
472 477anti-parallel
Strand 7
A
416 419anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
412 413first strand
Strand 2
A
479 480anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
563 565first strand
Strand 2
A
571 573anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il