Analysis of interatomic Contacts of Structural Units in PDB entry:
6F7K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6F7K entry

There are 3 chains in PDB entry 6F7K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LEU 253ASN 798
B
MET 252ASN 798
C
MET 252ILE 492
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 6F7K. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
253 260Right-handed alpha
Helix 2
AA2
A
275 281Right-handed alpha
Helix 3
AA3
A
301 316Right-handed alpha
Helix 4
AA4
A
416 420Right-handed 310
Helix 5
AA5
A
462 466Right-handed 310
Helix 6
AA6
A
583 589Right-handed alpha
Helix 7
AA7
A
658 663Right-handed alpha
Helix 8
AA8
A
778 781Right-handed 310
Helix 9
AA9
B
253 260Right-handed alpha
Helix 10
AB1
B
275 281Right-handed alpha
Helix 11
AB2
B
301 316Right-handed alpha
Helix 12
AB3
B
416 420Right-handed 310
Helix 13
AB4
B
462 466Right-handed 310
Helix 14
AB5
B
583 589Right-handed alpha
Helix 15
AB6
B
658 663Right-handed alpha
Helix 16
AB7
B
779 781Right-handed 310
Helix 17
AB8
C
253 260Right-handed alpha
Helix 18
AB9
C
275 281Right-handed alpha
Helix 19
AC1
C
301 316Right-handed alpha
Helix 20
AC2
C
416 420Right-handed 310
Helix 21
AC3
C
583 589Right-handed alpha
Helix 22
AC4
C
658 663Right-handed alpha
Helix 23
AC5
C
778 781Right-handed 310
Helix 24
AC6
D
253 260Right-handed alpha
Helix 25
AC7
D
275 281Right-handed alpha
Helix 26
AC8
D
301 316Right-handed alpha
Helix 27
AC9
D
416 420Right-handed 310
Helix 28
AD1
D
462 466Right-handed 310
Helix 29
AD2
D
583 589Right-handed alpha
Helix 30
AD3
D
658 663Right-handed alpha
Helix 31
AD4
D
778 781Right-handed 310
Helix 32
AD5
F
253 260Right-handed alpha
Helix 33
AD6
F
275 281Right-handed alpha
Helix 34
AD7
F
301 316Right-handed alpha
Helix 35
AD8
F
416 420Right-handed 310
Helix 36
AD9
F
462 466Right-handed 310
Helix 37
AE1
F
584 589Right-handed alpha
Helix 38
AE2
F
658 663Right-handed alpha
Helix 39
AE3
F
778 781Right-handed 310
Helix 40
AE4
G
253 260Right-handed alpha
Helix 41
AE5
G
275 281Right-handed alpha
Helix 42
AE6
G
301 315Right-handed alpha
Helix 43
AE7
G
416 420Right-handed 310
Helix 44
AE8
G
462 466Right-handed 310
Helix 45
AE9
G
583 589Right-handed alpha
Helix 46
AF1
G
656 662Right-handed 310
Helix 47
AF2
G
778 781Right-handed 310
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There are 60 sheets in PDB entry 6F7K. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO, AP, AQ, AR, AS, AT, AU, AV, AW, AX, AY, AZ, BA, BB, BC, BD, BE, BF, BG, BH,

There are 12 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
283 285first strand
Strand 2
A
318 321parallel
Strand 3
A
338 341parallel
Strand 4
A
367 369parallel
Strand 5
A
399 401parallel
Strand 6
A
433 435parallel
Strand 7
A
453 455parallel
Strand 8
A
491 493parallel
Strand 9
A
518 520parallel
Strand 10
A
550 552parallel
Strand 11
A
573 575parallel
Strand 12
A
614 616parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
324 327first strand
Strand 2
A
347 350parallel
Strand 3
A
372 374parallel
Strand 4
A
404 408parallel
Strand 5
A
438 441parallel
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There are 10 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
331 333first strand
Strand 2
A
359 361parallel
Strand 3
A
389 391parallel
Strand 4
A
425 427parallel
Strand 5
A
445 447parallel
Strand 6
A
482 485parallel
Strand 7
A
505 508parallel
Strand 8
A
532 535parallel
Strand 9
A
564 567parallel
Strand 10
A
599 602parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
496 498first strand
Strand 2
A
523 525parallel
Strand 3
A
555 557parallel
Strand 4
A
578 580parallel
Strand 5
A
619 621parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
513 515first strand
Strand 2
A
545 547parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
669 673first strand
Strand 2
A
691 697anti-parallel
Strand 3
A
700 708anti-parallel
Strand 4
A
788 796anti-parallel
Strand 5
A
741 743anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
676 679first strand
Strand 2
A
719 722anti-parallel
Strand 3
A
765 769anti-parallel
Strand 4
A
753 757anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
769 771first strand
Strand 2
A
774 776anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
683 686first strand
Strand 2
A
709 713anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
732 739first strand
Strand 2
A
791 797anti-parallel
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There are 12 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
283 285first strand
Strand 2
B
318 321parallel
Strand 3
B
338 341parallel
Strand 4
B
367 369parallel
Strand 5
B
399 401parallel
Strand 6
B
433 435parallel
Strand 7
B
453 455parallel
Strand 8
B
491 493parallel
Strand 9
B
518 520parallel
Strand 10
B
550 552parallel
Strand 11
B
573 575parallel
Strand 12
B
614 616parallel
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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
324 327first strand
Strand 2
B
347 350parallel
Strand 3
B
372 374parallel
Strand 4
B
404 408parallel
Strand 5
B
438 441parallel
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There are 10 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
331 333first strand
Strand 2
B
359 361parallel
Strand 3
B
389 391parallel
Strand 4
B
425 427parallel
Strand 5
B
445 447parallel
Strand 6
B
482 485parallel
Strand 7
B
505 508parallel
Strand 8
B
532 535parallel
Strand 9
B
564 567parallel
Strand 10
B
599 602parallel
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There are 5 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
496 498first strand
Strand 2
B
523 525parallel
Strand 3
B
555 557parallel
Strand 4
B
578 580parallel
Strand 5
B
619 621parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
513 515first strand
Strand 2
B
545 547parallel
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There are 5 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
669 673first strand
Strand 2
B
691 697anti-parallel
Strand 3
B
700 708anti-parallel
Strand 4
B
788 796anti-parallel
Strand 5
B
741 743anti-parallel
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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
676 679first strand
Strand 2
B
719 722anti-parallel
Strand 3
B
765 769anti-parallel
Strand 4
B
753 757anti-parallel
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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
769 771first strand
Strand 2
B
774 776anti-parallel
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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
683 686first strand
Strand 2
B
709 713anti-parallel
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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
732 739first strand
Strand 2
B
791 797anti-parallel
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There are 12 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
283 285first strand
Strand 2
C
318 321parallel
Strand 3
C
338 341parallel
Strand 4
C
367 369parallel
Strand 5
C
399 401parallel
Strand 6
C
433 435parallel
Strand 7
C
453 455parallel
Strand 8
C
491 493parallel
Strand 9
C
518 520parallel
Strand 10
C
550 552parallel
Strand 11
C
573 575parallel
Strand 12
C
614 616parallel
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There are 5 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
324 327first strand
Strand 2
C
347 350parallel
Strand 3
C
372 374parallel
Strand 4
C
404 408parallel
Strand 5
C
438 441parallel
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There are 10 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
331 333first strand
Strand 2
C
359 361parallel
Strand 3
C
389 391parallel
Strand 4
C
425 427parallel
Strand 5
C
445 447parallel
Strand 6
C
482 485parallel
Strand 7
C
505 508parallel
Strand 8
C
532 535parallel
Strand 9
C
564 567parallel
Strand 10
C
599 602parallel
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There are 5 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
496 498first strand
Strand 2
C
523 525parallel
Strand 3
C
555 557parallel
Strand 4
C
578 580parallel
Strand 5
C
619 621parallel
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There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
513 515first strand
Strand 2
C
545 547parallel
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There are 5 strands in Z sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
669 673first strand
Strand 2
C
691 697anti-parallel
Strand 3
C
700 708anti-parallel
Strand 4
C
788 796anti-parallel
Strand 5
C
741 743anti-parallel
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There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
676 679first strand
Strand 2
C
719 722anti-parallel
Strand 3
C
765 769anti-parallel
Strand 4
C
753 757anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
769 771first strand
Strand 2
C
774 776anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
683 686first strand
Strand 2
C
709 713anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
732 739first strand
Strand 2
C
791 797anti-parallel
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There are 12 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
283 285first strand
Strand 2
D
318 321parallel
Strand 3
D
338 341parallel
Strand 4
D
367 369parallel
Strand 5
D
399 401parallel
Strand 6
D
433 435parallel
Strand 7
D
453 455parallel
Strand 8
D
491 493parallel
Strand 9
D
518 520parallel
Strand 10
D
550 552parallel
Strand 11
D
573 575parallel
Strand 12
D
614 616parallel
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There are 5 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
324 327first strand
Strand 2
D
347 350parallel
Strand 3
D
372 374parallel
Strand 4
D
404 408parallel
Strand 5
D
438 441parallel
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There are 10 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
331 333first strand
Strand 2
D
359 361parallel
Strand 3
D
389 391parallel
Strand 4
D
425 427parallel
Strand 5
D
445 447parallel
Strand 6
D
482 485parallel
Strand 7
D
505 508parallel
Strand 8
D
532 535parallel
Strand 9
D
564 567parallel
Strand 10
D
599 602parallel
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There are 5 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
496 498first strand
Strand 2
D
523 525parallel
Strand 3
D
555 557parallel
Strand 4
D
578 580parallel
Strand 5
D
619 621parallel
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There are 2 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
513 515first strand
Strand 2
D
545 547parallel
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There are 5 strands in AJ sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
669 673first strand
Strand 2
D
691 697anti-parallel
Strand 3
D
700 708anti-parallel
Strand 4
D
788 796anti-parallel
Strand 5
D
741 743anti-parallel
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There are 4 strands in AK sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
676 679first strand
Strand 2
D
719 722anti-parallel
Strand 3
D
765 769anti-parallel
Strand 4
D
753 757anti-parallel
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There are 2 strands in AL sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
769 771first strand
Strand 2
D
774 776anti-parallel
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There are 2 strands in AM sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
683 686first strand
Strand 2
D
709 713anti-parallel
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There are 2 strands in AN sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
732 739first strand
Strand 2
D
791 797anti-parallel
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There are 11 strands in AO sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
319 321first strand
Strand 2
F
338 341parallel
Strand 3
F
367 369parallel
Strand 4
F
399 401parallel
Strand 5
F
433 435parallel
Strand 6
F
453 455parallel
Strand 7
F
491 493parallel
Strand 8
F
518 520parallel
Strand 9
F
550 552parallel
Strand 10
F
573 575parallel
Strand 11
F
614 616parallel
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There are 5 strands in AP sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
324 327first strand
Strand 2
F
347 350parallel
Strand 3
F
372 374parallel
Strand 4
F
404 408parallel
Strand 5
F
438 441parallel
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There are 10 strands in AQ sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
331 333first strand
Strand 2
F
359 361parallel
Strand 3
F
389 391parallel
Strand 4
F
425 427parallel
Strand 5
F
445 447parallel
Strand 6
F
482 485parallel
Strand 7
F
505 508parallel
Strand 8
F
532 535parallel
Strand 9
F
564 567parallel
Strand 10
F
599 602parallel
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There are 5 strands in AR sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
496 498first strand
Strand 2
F
523 525parallel
Strand 3
F
555 557parallel
Strand 4
F
578 580parallel
Strand 5
F
619 621parallel
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There are 2 strands in AS sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
513 515first strand
Strand 2
F
545 547parallel
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There are 5 strands in AT sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
669 673first strand
Strand 2
F
691 697anti-parallel
Strand 3
F
700 708anti-parallel
Strand 4
F
788 796anti-parallel
Strand 5
F
741 743anti-parallel
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There are 4 strands in AU sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
676 679first strand
Strand 2
F
719 722anti-parallel
Strand 3
F
765 769anti-parallel
Strand 4
F
753 757anti-parallel
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There are 2 strands in AV sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
769 771first strand
Strand 2
F
774 776anti-parallel
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There are 2 strands in AW sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
683 686first strand
Strand 2
F
709 713anti-parallel
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There are 2 strands in AX sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
732 739first strand
Strand 2
F
791 797anti-parallel
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There are 12 strands in AY sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
283 285first strand
Strand 2
G
318 321parallel
Strand 3
G
338 341parallel
Strand 4
G
367 369parallel
Strand 5
G
399 401parallel
Strand 6
G
433 435parallel
Strand 7
G
453 455parallel
Strand 8
G
491 493parallel
Strand 9
G
518 520parallel
Strand 10
G
550 552parallel
Strand 11
G
573 575parallel
Strand 12
G
614 616parallel
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There are 5 strands in AZ sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
324 327first strand
Strand 2
G
347 350parallel
Strand 3
G
372 374parallel
Strand 4
G
404 408parallel
Strand 5
G
438 441parallel
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There are 10 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
331 333first strand
Strand 2
G
359 361parallel
Strand 3
G
389 391parallel
Strand 4
G
425 427parallel
Strand 5
G
445 447parallel
Strand 6
G
482 485parallel
Strand 7
G
505 508parallel
Strand 8
G
532 535parallel
Strand 9
G
564 567parallel
Strand 10
G
599 602parallel
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There are 5 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
496 498first strand
Strand 2
G
523 525parallel
Strand 3
G
555 557parallel
Strand 4
G
578 580parallel
Strand 5
G
619 621parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
513 515first strand
Strand 2
G
545 547parallel
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There are 5 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
669 673first strand
Strand 2
G
691 697anti-parallel
Strand 3
G
700 708anti-parallel
Strand 4
G
788 796anti-parallel
Strand 5
G
741 743anti-parallel
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There are 2 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
676 679first strand
Strand 2
G
719 722anti-parallel
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There are 3 strands in BF sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
753 757first strand
Strand 2
G
765 771anti-parallel
Strand 3
G
774 776anti-parallel
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There are 2 strands in BG sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
683 686first strand
Strand 2
G
709 713anti-parallel
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There are 2 strands in BH sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
732 739first strand
Strand 2
G
791 797anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il