Analysis of interatomic Contacts of Structural Units in PDB entry:
6F7P

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6F7P entry

There are 4 chains in PDB entry 6F7P (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 149	GLU 269
C	PRO 413	PRO 762
B	VAL 148	GLU 269
D	LYS 412	PRO 762

There are 41 helices in PDB entry 6F7P. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	151	158	Right-handed alpha
Helix 2	AA2	A	164	191	Right-handed alpha
Helix 3	AA3	A	194	202	Right-handed alpha
Helix 4	AA4	A	202	231	Right-handed alpha
Helix 5	AA5	A	242	259	Right-handed alpha
Helix 6	AA6	A	261	266	Right-handed alpha
Helix 7	AA7	A	267	269	Right-handed 310
Helix 8	AA8	C	432	442	Right-handed alpha
Helix 9	AA9	C	474	481	Right-handed alpha
Helix 10	AB1	C	507	511	Right-handed 310
Helix 11	AB2	C	512	535	Right-handed alpha
Helix 12	AB3	C	554	563	Right-handed alpha
Helix 13	AB4	C	569	576	Right-handed alpha
Helix 14	AB5	C	601	618	Right-handed alpha
Helix 15	AB6	C	656	670	Right-handed alpha
Helix 16	AB7	C	671	674	Right-handed 310
Helix 17	AB8	C	680	688	Right-handed alpha
Helix 18	AB9	C	691	704	Right-handed alpha
Helix 19	AC1	C	723	735	Right-handed alpha
Helix 20	AC2	C	735	755	Right-handed alpha
Helix 21	AC3	B	151	158	Right-handed alpha
Helix 22	AC4	B	164	191	Right-handed alpha
Helix 23	AC5	B	194	202	Right-handed alpha
Helix 24	AC6	B	202	231	Right-handed alpha
Helix 25	AC7	B	242	259	Right-handed alpha
Helix 26	AC8	B	261	266	Right-handed alpha
Helix 27	AC9	B	267	269	Right-handed 310
Helix 28	AD1	D	432	442	Right-handed alpha
Helix 29	AD2	D	474	481	Right-handed alpha
Helix 30	AD3	D	507	511	Right-handed 310
Helix 31	AD4	D	512	535	Right-handed alpha
Helix 32	AD5	D	554	558	Right-handed 310
Helix 33	AD6	D	560	565	Right-handed alpha
Helix 34	AD7	D	569	577	Right-handed alpha
Helix 35	AD8	D	601	618	Right-handed alpha
Helix 36	AD9	D	656	670	Right-handed alpha
Helix 37	AE1	D	671	674	Right-handed 310
Helix 38	AE2	D	680	688	Right-handed alpha
Helix 39	AE3	D	691	704	Right-handed alpha
Helix 40	AE4	D	723	735	Right-handed alpha
Helix 41	AE5	D	735	755	Right-handed alpha

There are 10 sheets in PDB entry 6F7P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	446	451	first strand
Strand 2	C	462	468	anti-parallel
Strand 3	C	421	427	anti-parallel
Strand 4	C	494	496	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	485	486	first strand
Strand 2	C	489	490	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	503	505	first strand
Strand 2	C	642	644	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	621	622	first strand
Strand 2	C	627	628	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	705	708	first strand
Strand 2	C	711	713	anti-parallel
Strand 3	C	720	721	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	446	451	first strand
Strand 2	D	462	468	anti-parallel
Strand 3	D	421	427	anti-parallel
Strand 4	D	494	496	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	485	486	first strand
Strand 2	D	489	490	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	503	505	first strand
Strand 2	D	642	644	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	621	622	first strand
Strand 2	D	627	628	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	705	708	first strand
Strand 2	D	711	713	anti-parallel
Strand 3	D	720	721	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6F7P

Analysis of interatomic Contacts of Structural Units in PDB entry:
6F7P