Analysis of interatomic Contacts of Structural Units in PDB entry:
6F7S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6F7S entry

There are 4 chains in PDB entry 6F7S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 148GLU 269
C
 CYS 411PRO 762
B
 MET 149GLU 269
D
 LYS 412PRO 762
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 6F7S. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
151 157Right-handed alpha
Helix 2
AA2
A
165 191Right-handed alpha
Helix 3
AA3
A
194 202Right-handed alpha
Helix 4
AA4
A
202 231Right-handed alpha
Helix 5
AA5
A
239 241Right-handed 310
Helix 6
AA6
A
242 258Right-handed alpha
Helix 7
AA7
A
263 269Right-handed 310
Helix 8
AA8
C
432 442Right-handed alpha
Helix 9
AA9
C
455 459Right-handed 310
Helix 10
AB1
C
473 482Right-handed alpha
Helix 11
AB2
C
507 511Right-handed 310
Helix 12
AB3
C
512 535Right-handed alpha
Helix 13
AB4
C
560 566Right-handed alpha
Helix 14
AB5
C
601 618Right-handed alpha
Helix 15
AB6
C
654 670Right-handed alpha
Helix 16
AB7
C
671 674Right-handed 310
Helix 17
AB8
C
680 688Right-handed alpha
Helix 18
AB9
C
691 703Right-handed alpha
Helix 19
AC1
C
723 735Right-handed alpha
Helix 20
AC2
C
735 755Right-handed alpha
Helix 21
AC3
B
151 157Right-handed alpha
Helix 22
AC4
B
165 191Right-handed alpha
Helix 23
AC5
B
194 202Right-handed alpha
Helix 24
AC6
B
202 231Right-handed alpha
Helix 25
AC7
B
239 241Right-handed 310
Helix 26
AC8
B
242 258Right-handed alpha
Helix 27
AC9
B
263 269Right-handed 310
Helix 28
AD1
D
432 442Right-handed alpha
Helix 29
AD2
D
455 459Right-handed 310
Helix 30
AD3
D
473 482Right-handed alpha
Helix 31
AD4
D
507 511Right-handed 310
Helix 32
AD5
D
512 535Right-handed alpha
Helix 33
AD6
D
601 618Right-handed alpha
Helix 34
AD7
D
654 670Right-handed alpha
Helix 35
AD8
D
671 674Right-handed 310
Helix 36
AD9
D
680 688Right-handed alpha
Helix 37
AE1
D
691 703Right-handed alpha
Helix 38
AE2
D
723 735Right-handed alpha
Helix 39
AE3
D
735 755Right-handed alpha
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There are 8 sheets in PDB entry 6F7S. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
446 451first strand
Strand 2
C
462 468anti-parallel
Strand 3
C
421 427anti-parallel
Strand 4
C
493 496anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
503 506first strand
Strand 2
C
642 645parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
621 622first strand
Strand 2
C
627 628anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
705 708first strand
Strand 2
C
711 713anti-parallel
Strand 3
C
720 721anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
446 451first strand
Strand 2
D
462 468anti-parallel
Strand 3
D
421 427anti-parallel
Strand 4
D
493 496anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
503 506first strand
Strand 2
D
642 645parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
621 622first strand
Strand 2
D
627 628anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
705 708first strand
Strand 2
D
711 713anti-parallel
Strand 3
D
720 721anti-parallel
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