Analysis of interatomic Contacts of Structural Units in PDB entry:
6F8L

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6F8L entry

There are 18 chains in PDB entry 6F8L (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
G	LEU 330	TYR 475
J	GLN 163	TYR 299
K	GLN 163	TYR 299
L	GLN 163	TYR 299
H	LEU 330	TYR 475
I	LEU 330	TYR 475
M	LEU 330	TYR 475
N	GLN 163	TYR 299
O	GLN 163	TYR 299
P	GLN 163	TYR 299
Q	LEU 330	TYR 475
R	LEU 330	TYR 475
A	SER 505	ILE 888
B	SER 505	THR 887
C	SER 505	ILE 888
D	SER 505	ILE 888
E	SER 505	ILE 888
F	SER 505	ILE 888

There are195 helices in PDB entry 6F8L. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	G	335	343	Right-handed alpha
Helix 2	AA2	G	347	362	Right-handed alpha
Helix 3	AA3	G	364	372	Right-handed alpha
Helix 4	AA4	G	376	389	Right-handed alpha
Helix 5	AA5	G	404	408	Right-handed 310
Helix 6	AA6	G	409	417	Right-handed alpha
Helix 7	AA7	G	437	452	Right-handed alpha
Helix 8	AA8	G	463	475	Right-handed alpha
Helix 9	AA9	J	169	175	Right-handed alpha
Helix 10	AB1	J	179	194	Right-handed alpha
Helix 11	AB2	J	196	202	Right-handed alpha
Helix 12	AB3	J	207	220	Right-handed alpha
Helix 13	AB4	J	226	230	Right-handed 310
Helix 14	AB5	J	233	240	Right-handed 310
Helix 15	AB6	J	241	249	Right-handed alpha
Helix 16	AB7	J	269	274	Right-handed alpha
Helix 17	AB8	J	287	299	Right-handed alpha
Helix 18	AB9	K	169	175	Right-handed alpha
Helix 19	AC1	K	179	194	Right-handed alpha
Helix 20	AC2	K	196	202	Right-handed alpha
Helix 21	AC3	K	207	220	Right-handed alpha
Helix 22	AC4	K	233	238	Right-handed alpha
Helix 23	AC5	K	241	249	Right-handed alpha
Helix 24	AC6	K	269	275	Right-handed alpha
Helix 25	AC7	K	287	299	Right-handed alpha
Helix 26	AC8	L	169	175	Right-handed alpha
Helix 27	AC9	L	179	192	Right-handed alpha
Helix 28	AD1	L	196	202	Right-handed alpha
Helix 29	AD2	L	207	219	Right-handed alpha
Helix 30	AD3	L	233	238	Right-handed alpha
Helix 31	AD4	L	241	249	Right-handed alpha
Helix 32	AD5	L	287	297	Right-handed alpha
Helix 33	AD6	H	335	344	Right-handed alpha
Helix 34	AD7	H	347	362	Right-handed alpha
Helix 35	AD8	H	364	372	Right-handed alpha
Helix 36	AD9	H	376	389	Right-handed alpha
Helix 37	AE1	H	402	408	Right-handed alpha
Helix 38	AE2	H	409	417	Right-handed alpha
Helix 39	AE3	H	437	452	Right-handed alpha
Helix 40	AE4	H	463	474	Right-handed alpha
Helix 41	AE5	I	335	343	Right-handed alpha
Helix 42	AE6	I	347	362	Right-handed alpha
Helix 43	AE7	I	364	373	Right-handed alpha
Helix 44	AE8	I	379	389	Right-handed alpha
Helix 45	AE9	I	403	408	Right-handed alpha
Helix 46	AF1	I	409	417	Right-handed alpha
Helix 47	AF2	I	437	451	Right-handed alpha
Helix 48	AF3	I	463	475	Right-handed alpha
Helix 49	AF4	M	335	343	Right-handed alpha
Helix 50	AF5	M	347	362	Right-handed alpha
Helix 51	AF6	M	364	372	Right-handed alpha
Helix 52	AF7	M	376	389	Right-handed alpha
Helix 53	AF8	M	404	408	Right-handed 310
Helix 54	AF9	M	409	417	Right-handed alpha
Helix 55	AG1	M	437	451	Right-handed alpha
Helix 56	AG2	M	464	475	Right-handed alpha
Helix 57	AG3	N	169	175	Right-handed alpha
Helix 58	AG4	N	179	194	Right-handed alpha
Helix 59	AG5	N	196	202	Right-handed alpha
Helix 60	AG6	N	207	220	Right-handed alpha
Helix 61	AG7	N	235	240	Right-handed 310
Helix 62	AG8	N	241	249	Right-handed alpha
Helix 63	AG9	N	269	274	Right-handed alpha
Helix 64	AH1	N	287	299	Right-handed alpha
Helix 65	AH2	O	169	176	Right-handed alpha
Helix 66	AH3	O	179	194	Right-handed alpha
Helix 67	AH4	O	196	202	Right-handed alpha
Helix 68	AH5	O	207	220	Right-handed alpha
Helix 69	AH6	O	235	240	Right-handed 310
Helix 70	AH7	O	241	249	Right-handed alpha
Helix 71	AH8	O	269	274	Right-handed alpha
Helix 72	AH9	O	287	297	Right-handed alpha
Helix 73	AI1	P	169	175	Right-handed alpha
Helix 74	AI2	P	179	194	Right-handed alpha
Helix 75	AI3	P	196	202	Right-handed alpha
Helix 76	AI4	P	207	220	Right-handed alpha
Helix 77	AI5	P	233	238	Right-handed alpha
Helix 78	AI6	P	241	249	Right-handed alpha
Helix 79	AI7	P	269	274	Right-handed alpha
Helix 80	AI8	P	287	299	Right-handed alpha
Helix 81	AI9	Q	335	343	Right-handed alpha
Helix 82	AJ1	Q	347	362	Right-handed alpha
Helix 83	AJ2	Q	364	372	Right-handed alpha
Helix 84	AJ3	Q	376	389	Right-handed alpha
Helix 85	AJ4	Q	402	408	Right-handed alpha
Helix 86	AJ5	Q	409	417	Right-handed alpha
Helix 87	AJ6	Q	437	450	Right-handed alpha
Helix 88	AJ7	Q	463	475	Right-handed alpha
Helix 89	AJ8	R	335	343	Right-handed alpha
Helix 90	AJ9	R	347	359	Right-handed alpha
Helix 91	AK1	R	364	372	Right-handed alpha
Helix 92	AK2	R	377	389	Right-handed alpha
Helix 93	AK3	R	403	407	Right-handed 310
Helix 94	AK4	R	409	417	Right-handed alpha
Helix 95	AK5	R	437	448	Right-handed alpha
Helix 96	AK6	R	449	452	Right-handed 310
Helix 97	AK7	R	463	475	Right-handed alpha
Helix 98	AK8	A	506	521	Right-handed alpha
Helix 99	AK9	A	553	568	Right-handed alpha
Helix 100	AL1	A	619	623	Right-handed 310
Helix 101	AL2	A	626	638	Right-handed alpha
Helix 102	AL3	A	653	666	Right-handed alpha
Helix 103	AL4	A	698	709	Right-handed alpha
Helix 104	AL5	A	721	734	Right-handed alpha
Helix 105	AL6	A	746	757	Right-handed alpha
Helix 106	AL7	A	760	767	Right-handed alpha
Helix 107	AL8	A	791	798	Right-handed alpha
Helix 108	AL9	A	800	806	Right-handed alpha
Helix 109	AM1	A	816	820	Right-handed 310
Helix 110	AM2	A	837	847	Right-handed alpha
Helix 111	AM3	A	849	860	Right-handed alpha
Helix 112	AM4	A	864	875	Right-handed alpha
Helix 113	AM5	A	883	887	Right-handed 310
Helix 114	AM6	B	506	521	Right-handed alpha
Helix 115	AM7	B	553	568	Right-handed alpha
Helix 116	AM8	B	613	617	Right-handed 310
Helix 117	AM9	B	619	623	Right-handed 310
Helix 118	AN1	B	626	638	Right-handed alpha
Helix 119	AN2	B	653	666	Right-handed alpha
Helix 120	AN3	B	692	696	Right-handed 310
Helix 121	AN4	B	698	709	Right-handed alpha
Helix 122	AN5	B	721	734	Right-handed alpha
Helix 123	AN6	B	746	757	Right-handed alpha
Helix 124	AN7	B	760	767	Right-handed alpha
Helix 125	AN8	B	791	798	Right-handed alpha
Helix 126	AN9	B	801	806	Right-handed alpha
Helix 127	AO1	B	816	820	Right-handed 310
Helix 128	AO2	B	837	846	Right-handed alpha
Helix 129	AO3	B	849	860	Right-handed alpha
Helix 130	AO4	B	864	875	Right-handed alpha
Helix 131	AO5	B	879	886	Right-handed alpha
Helix 132	AO6	C	507	521	Right-handed alpha
Helix 133	AO7	C	553	568	Right-handed alpha
Helix 134	AO8	C	619	624	Right-handed 310
Helix 135	AO9	C	626	638	Right-handed alpha
Helix 136	AP1	C	653	666	Right-handed alpha
Helix 137	AP2	C	698	708	Right-handed alpha
Helix 138	AP3	C	721	735	Right-handed alpha
Helix 139	AP4	C	748	757	Right-handed alpha
Helix 140	AP5	C	760	767	Right-handed alpha
Helix 141	AP6	C	791	798	Right-handed alpha
Helix 142	AP7	C	802	807	Right-handed alpha
Helix 143	AP8	C	819	822	Right-handed 310
Helix 144	AP9	C	837	847	Right-handed alpha
Helix 145	AQ1	C	849	859	Right-handed alpha
Helix 146	AQ2	C	860	862	Right-handed 310
Helix 147	AQ3	C	864	874	Right-handed alpha
Helix 148	AQ4	C	879	888	Right-handed alpha
Helix 149	AQ5	D	507	521	Right-handed alpha
Helix 150	AQ6	D	553	567	Right-handed alpha
Helix 151	AQ7	D	619	624	Right-handed 310
Helix 152	AQ8	D	626	638	Right-handed alpha
Helix 153	AQ9	D	653	666	Right-handed alpha
Helix 154	AR1	D	698	709	Right-handed alpha
Helix 155	AR2	D	721	734	Right-handed alpha
Helix 156	AR3	D	748	757	Right-handed alpha
Helix 157	AR4	D	760	767	Right-handed alpha
Helix 158	AR5	D	791	798	Right-handed alpha
Helix 159	AR6	D	801	808	Right-handed alpha
Helix 160	AR7	D	837	847	Right-handed alpha
Helix 161	AR8	D	849	859	Right-handed alpha
Helix 162	AR9	D	864	874	Right-handed alpha
Helix 163	AS1	D	879	888	Right-handed alpha
Helix 164	AS2	E	506	522	Right-handed alpha
Helix 165	AS3	E	554	568	Right-handed alpha
Helix 166	AS4	E	614	617	Right-handed 310
Helix 167	AS5	E	619	623	Right-handed 310
Helix 168	AS6	E	626	638	Right-handed alpha
Helix 169	AS7	E	653	666	Right-handed alpha
Helix 170	AS8	E	698	709	Right-handed alpha
Helix 171	AS9	E	721	734	Right-handed alpha
Helix 172	AT1	E	746	757	Right-handed alpha
Helix 173	AT2	E	760	767	Right-handed alpha
Helix 174	AT3	E	792	798	Right-handed alpha
Helix 175	AT4	E	801	807	Right-handed alpha
Helix 176	AT5	E	837	846	Right-handed alpha
Helix 177	AT6	E	849	860	Right-handed alpha
Helix 178	AT7	E	864	875	Right-handed alpha
Helix 179	AT8	E	879	886	Right-handed alpha
Helix 180	AT9	F	506	521	Right-handed alpha
Helix 181	AU1	F	554	568	Right-handed alpha
Helix 182	AU2	F	613	617	Right-handed 310
Helix 183	AU3	F	619	623	Right-handed 310
Helix 184	AU4	F	626	638	Right-handed alpha
Helix 185	AU5	F	653	666	Right-handed alpha
Helix 186	AU6	F	698	709	Right-handed alpha
Helix 187	AU7	F	721	735	Right-handed alpha
Helix 188	AU8	F	748	757	Right-handed alpha
Helix 189	AU9	F	760	767	Right-handed alpha
Helix 190	AV1	F	791	799	Right-handed alpha
Helix 191	AV2	F	801	806	Right-handed alpha
Helix 192	AV3	F	837	846	Right-handed alpha
Helix 193	AV4	F	849	860	Right-handed alpha
Helix 194	AV5	F	864	875	Right-handed alpha
Helix 195	AV6	F	879	885	Right-handed alpha

There are 31 sheets in PDB entry 6F8L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	418	424	first strand
Strand 2	G	427	432	anti-parallel
Strand 3	G	457	461	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	222	223	first strand
Strand 2	J	281	285	parallel
Strand 3	J	259	262	parallel
Strand 4	J	252	256	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	222	223	first strand
Strand 2	K	281	285	parallel
Strand 3	K	259	264	parallel
Strand 4	K	252	256	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	222	223	first strand
Strand 2	L	281	285	parallel
Strand 3	L	260	264	parallel
Strand 4	L	250	253	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	421	424	first strand
Strand 2	H	427	429	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	418	424	first strand
Strand 2	I	427	432	anti-parallel
Strand 3	I	457	461	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	419	424	first strand
Strand 2	M	427	432	anti-parallel
Strand 3	M	457	461	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	222	223	first strand
Strand 2	N	281	285	parallel
Strand 3	N	259	264	parallel
Strand 4	N	250	256	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	222	223	first strand
Strand 2	O	281	285	parallel
Strand 3	O	259	264	parallel
Strand 4	O	252	256	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	222	223	first strand
Strand 2	P	281	285	parallel
Strand 3	P	259	264	parallel
Strand 4	P	252	256	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	418	424	first strand
Strand 2	Q	427	432	anti-parallel
Strand 3	Q	460	461	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	418	424	first strand
Strand 2	R	427	432	anti-parallel
Strand 3	R	457	461	parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	544	552	first strand
Strand 2	A	534	541	anti-parallel
Strand 3	A	523	530	anti-parallel
Strand 4	A	603	610	anti-parallel
Strand 5	A	589	600	anti-parallel
Strand 6	A	578	586	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	612	613	first strand
Strand 2	A	681	682	parallel

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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	686	690	first strand
Strand 2	A	672	676	parallel
Strand 3	A	713	716	parallel
Strand 4	A	737	742	parallel
Strand 5	A	642	647	parallel
Strand 6	A	768	780	parallel
Strand 7	A	824	835	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	785	788	first strand
Strand 2	A	810	813	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	544	552	first strand
Strand 2	B	534	541	anti-parallel
Strand 3	B	523	530	anti-parallel
Strand 4	B	603	611	anti-parallel
Strand 5	B	592	600	anti-parallel
Strand 6	B	578	582	anti-parallel

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There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	686	690	first strand
Strand 2	B	672	676	parallel
Strand 3	B	713	716	parallel
Strand 4	B	737	742	parallel
Strand 5	B	642	647	parallel
Strand 6	B	768	780	parallel
Strand 7	B	824	835	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	785	788	first strand
Strand 2	B	810	813	anti-parallel

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There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	544	552	first strand
Strand 2	C	534	541	anti-parallel
Strand 3	C	525	530	anti-parallel
Strand 4	C	603	611	anti-parallel
Strand 5	C	592	600	anti-parallel
Strand 6	C	578	582	anti-parallel

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There are 7 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	687	690	first strand
Strand 2	C	672	676	parallel
Strand 3	C	713	716	parallel
Strand 4	C	737	743	parallel
Strand 5	C	642	648	parallel
Strand 6	C	768	780	parallel
Strand 7	C	824	835	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	785	788	first strand
Strand 2	C	810	813	anti-parallel

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There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	544	552	first strand
Strand 2	D	534	541	anti-parallel
Strand 3	D	525	530	anti-parallel
Strand 4	D	603	611	anti-parallel
Strand 5	D	592	600	anti-parallel
Strand 6	D	579	582	anti-parallel

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There are 7 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	687	690	first strand
Strand 2	D	672	676	parallel
Strand 3	D	713	716	parallel
Strand 4	D	737	741	parallel
Strand 5	D	642	647	parallel
Strand 6	D	768	778	parallel
Strand 7	D	827	835	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	785	787	first strand
Strand 2	D	811	813	anti-parallel

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There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	544	552	first strand
Strand 2	E	534	541	anti-parallel
Strand 3	E	523	530	anti-parallel
Strand 4	E	603	612	anti-parallel
Strand 5	E	590	600	anti-parallel
Strand 6	E	578	585	anti-parallel

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There are 7 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	687	690	first strand
Strand 2	E	672	676	parallel
Strand 3	E	713	718	parallel
Strand 4	E	737	742	parallel
Strand 5	E	642	647	parallel
Strand 6	E	768	780	parallel
Strand 7	E	824	835	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	785	787	first strand
Strand 2	E	811	813	anti-parallel

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There are 6 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	544	551	first strand
Strand 2	F	535	541	anti-parallel
Strand 3	F	523	529	anti-parallel
Strand 4	F	605	610	anti-parallel
Strand 5	F	589	598	anti-parallel
Strand 6	F	578	586	anti-parallel

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There are 7 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	687	690	first strand
Strand 2	F	672	676	parallel
Strand 3	F	713	716	parallel
Strand 4	F	737	742	parallel
Strand 5	F	642	647	parallel
Strand 6	F	768	780	parallel
Strand 7	F	824	835	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	785	787	first strand
Strand 2	F	811	813	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6F8L

Analysis of interatomic Contacts of Structural Units in PDB entry:
6F8L