Analysis of interatomic Contacts of Structural Units in PDB entry:
6F92

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6F92 entry

There are 4 chains in PDB entry 6F92 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 5	HIS 764
B	GLU 5	SER 753
C	GLU 5	LYS 751
D	GLU 5	HIS 764

There are106 helices in PDB entry 6F92. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	6	11	Right-handed 310
Helix 2	AA2	A	105	107	Right-handed 310
Helix 3	AA3	A	199	201	Right-handed 310
Helix 4	AA4	A	254	262	Right-handed alpha
Helix 5	AA5	A	263	266	Right-handed 310
Helix 6	AA6	A	269	286	Right-handed alpha
Helix 7	AA7	A	293	307	Right-handed alpha
Helix 8	AA8	A	341	346	Right-handed alpha
Helix 9	AA9	A	348	357	Right-handed alpha
Helix 10	AB1	A	357	373	Right-handed alpha
Helix 11	AB2	A	397	408	Right-handed alpha
Helix 12	AB3	A	414	427	Right-handed alpha
Helix 13	AB4	A	433	441	Right-handed alpha
Helix 14	AB5	A	450	472	Right-handed alpha
Helix 15	AB6	A	474	485	Right-handed alpha
Helix 16	AB7	A	486	492	Right-handed 310
Helix 17	AB8	A	533	538	Right-handed alpha
Helix 18	AB9	A	544	553	Right-handed alpha
Helix 19	AC1	A	553	567	Right-handed alpha
Helix 20	AC2	A	590	594	Right-handed 310
Helix 21	AC3	A	595	597	Right-handed 310
Helix 22	AC4	A	598	603	Right-handed alpha
Helix 23	AC5	A	605	621	Right-handed alpha
Helix 24	AC6	A	635	647	Right-handed alpha
Helix 25	AC7	A	709	714	Right-handed alpha
Helix 26	AC8	A	733	737	Right-handed 310
Helix 27	AC9	A	752	764	Right-handed alpha
Helix 28	AD1	B	6	11	Right-handed 310
Helix 29	AD2	B	105	107	Right-handed 310
Helix 30	AD3	B	199	201	Right-handed 310
Helix 31	AD4	B	254	262	Right-handed alpha
Helix 32	AD5	B	263	266	Right-handed 310
Helix 33	AD6	B	269	286	Right-handed alpha
Helix 34	AD7	B	293	307	Right-handed alpha
Helix 35	AD8	B	341	346	Right-handed alpha
Helix 36	AD9	B	348	357	Right-handed alpha
Helix 37	AE1	B	357	373	Right-handed alpha
Helix 38	AE2	B	397	408	Right-handed alpha
Helix 39	AE3	B	414	427	Right-handed alpha
Helix 40	AE4	B	433	441	Right-handed alpha
Helix 41	AE5	B	450	472	Right-handed alpha
Helix 42	AE6	B	474	485	Right-handed alpha
Helix 43	AE7	B	486	492	Right-handed 310
Helix 44	AE8	B	533	538	Right-handed alpha
Helix 45	AE9	B	544	553	Right-handed alpha
Helix 46	AF1	B	553	567	Right-handed alpha
Helix 47	AF2	B	590	594	Right-handed 310
Helix 48	AF3	B	595	597	Right-handed 310
Helix 49	AF4	B	598	603	Right-handed alpha
Helix 50	AF5	B	605	621	Right-handed alpha
Helix 51	AF6	B	635	647	Right-handed alpha
Helix 52	AF7	B	709	714	Right-handed alpha
Helix 53	AF8	B	733	737	Right-handed 310
Helix 54	AF9	C	6	11	Right-handed 310
Helix 55	AG1	C	105	107	Right-handed 310
Helix 56	AG2	C	199	201	Right-handed 310
Helix 57	AG3	C	254	262	Right-handed alpha
Helix 58	AG4	C	263	266	Right-handed 310
Helix 59	AG5	C	269	286	Right-handed alpha
Helix 60	AG6	C	293	307	Right-handed alpha
Helix 61	AG7	C	341	346	Right-handed alpha
Helix 62	AG8	C	348	357	Right-handed alpha
Helix 63	AG9	C	357	373	Right-handed alpha
Helix 64	AH1	C	397	408	Right-handed alpha
Helix 65	AH2	C	414	427	Right-handed alpha
Helix 66	AH3	C	433	441	Right-handed alpha
Helix 67	AH4	C	450	472	Right-handed alpha
Helix 68	AH5	C	474	486	Right-handed alpha
Helix 69	AH6	C	487	492	Right-handed 310
Helix 70	AH7	C	533	538	Right-handed alpha
Helix 71	AH8	C	544	553	Right-handed alpha
Helix 72	AH9	C	553	567	Right-handed alpha
Helix 73	AI1	C	590	594	Right-handed 310
Helix 74	AI2	C	595	597	Right-handed 310
Helix 75	AI3	C	598	603	Right-handed alpha
Helix 76	AI4	C	605	621	Right-handed alpha
Helix 77	AI5	C	635	647	Right-handed alpha
Helix 78	AI6	C	709	714	Right-handed alpha
Helix 79	AI7	C	733	737	Right-handed 310
Helix 80	AI8	D	6	11	Right-handed 310
Helix 81	AI9	D	105	107	Right-handed 310
Helix 82	AJ1	D	199	201	Right-handed 310
Helix 83	AJ2	D	254	262	Right-handed alpha
Helix 84	AJ3	D	263	266	Right-handed 310
Helix 85	AJ4	D	269	286	Right-handed alpha
Helix 86	AJ5	D	293	307	Right-handed alpha
Helix 87	AJ6	D	341	346	Right-handed alpha
Helix 88	AJ7	D	348	357	Right-handed alpha
Helix 89	AJ8	D	357	373	Right-handed alpha
Helix 90	AJ9	D	397	408	Right-handed alpha
Helix 91	AK1	D	414	427	Right-handed alpha
Helix 92	AK2	D	433	441	Right-handed alpha
Helix 93	AK3	D	450	472	Right-handed alpha
Helix 94	AK4	D	474	486	Right-handed alpha
Helix 95	AK5	D	487	492	Right-handed 310
Helix 96	AK6	D	533	538	Right-handed alpha
Helix 97	AK7	D	544	553	Right-handed alpha
Helix 98	AK8	D	553	567	Right-handed alpha
Helix 99	AK9	D	590	594	Right-handed 310
Helix 100	AL1	D	595	597	Right-handed 310
Helix 101	AL2	D	598	603	Right-handed alpha
Helix 102	AL3	D	605	621	Right-handed alpha
Helix 103	AL4	D	635	647	Right-handed alpha
Helix 104	AL5	D	709	714	Right-handed alpha
Helix 105	AL6	D	733	737	Right-handed 310
Helix 106	AL7	D	752	761	Right-handed alpha

There are 40 sheets in PDB entry 6F92. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	37	39	first strand
Strand 2	A	60	62	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	57	58	first strand
Strand 2	A	102	103	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	78	83	first strand
Strand 2	A	145	153	anti-parallel
Strand 3	A	230	238	anti-parallel
Strand 4	A	203	207	anti-parallel
Strand 5	A	210	211	anti-parallel

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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	109	112	first strand
Strand 2	A	115	119	anti-parallel
Strand 3	A	126	131	anti-parallel
Strand 4	A	135	142	anti-parallel
Strand 5	A	242	251	anti-parallel
Strand 6	A	188	196	anti-parallel
Strand 7	A	174	182	anti-parallel
Strand 8	A	161	169	anti-parallel
Strand 9	A	224	227	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	288	291	first strand
Strand 2	A	667	671	anti-parallel
Strand 3	A	677	683	anti-parallel
Strand 4	A	716	723	parallel
Strand 5	A	691	697	anti-parallel
Strand 6	A	700	701	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	312	313	first strand
Strand 2	A	337	338	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	320	322	first strand
Strand 2	A	328	330	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	384	385	first strand
Strand 2	A	388	389	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	582	583	first strand
Strand 2	A	586	587	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	648	649	first strand
Strand 2	A	657	660	anti-parallel
Strand 3	A	706	708	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	37	39	first strand
Strand 2	B	60	62	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	57	58	first strand
Strand 2	B	102	103	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	78	83	first strand
Strand 2	B	145	153	anti-parallel
Strand 3	B	230	238	anti-parallel
Strand 4	B	203	207	anti-parallel
Strand 5	B	210	211	anti-parallel

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There are 9 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	109	112	first strand
Strand 2	B	115	119	anti-parallel
Strand 3	B	126	131	anti-parallel
Strand 4	B	135	142	anti-parallel
Strand 5	B	242	251	anti-parallel
Strand 6	B	188	196	anti-parallel
Strand 7	B	174	182	anti-parallel
Strand 8	B	161	169	anti-parallel
Strand 9	B	224	226	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	288	291	first strand
Strand 2	B	667	671	anti-parallel
Strand 3	B	677	683	anti-parallel
Strand 4	B	716	723	parallel
Strand 5	B	691	697	anti-parallel
Strand 6	B	700	701	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	312	313	first strand
Strand 2	B	337	338	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	320	322	first strand
Strand 2	B	328	330	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	384	385	first strand
Strand 2	B	388	389	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	582	583	first strand
Strand 2	B	586	587	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	648	649	first strand
Strand 2	B	657	660	anti-parallel
Strand 3	B	706	708	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	37	39	first strand
Strand 2	C	60	62	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	57	58	first strand
Strand 2	C	102	103	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	78	83	first strand
Strand 2	C	145	153	anti-parallel
Strand 3	C	230	238	anti-parallel
Strand 4	C	202	207	anti-parallel
Strand 5	C	210	211	anti-parallel

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There are 9 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	109	112	first strand
Strand 2	C	115	119	anti-parallel
Strand 3	C	126	131	anti-parallel
Strand 4	C	135	142	anti-parallel
Strand 5	C	242	251	anti-parallel
Strand 6	C	188	196	anti-parallel
Strand 7	C	174	182	anti-parallel
Strand 8	C	161	169	anti-parallel
Strand 9	C	224	227	anti-parallel

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There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	288	291	first strand
Strand 2	C	667	671	anti-parallel
Strand 3	C	677	683	anti-parallel
Strand 4	C	716	723	parallel
Strand 5	C	691	697	anti-parallel
Strand 6	C	700	701	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	312	313	first strand
Strand 2	C	337	338	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	320	322	first strand
Strand 2	C	328	330	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	384	385	first strand
Strand 2	C	388	389	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	582	583	first strand
Strand 2	C	586	587	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	648	649	first strand
Strand 2	C	657	660	anti-parallel
Strand 3	C	706	708	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	37	39	first strand
Strand 2	D	60	62	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	57	58	first strand
Strand 2	D	102	103	anti-parallel

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There are 5 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	78	83	first strand
Strand 2	D	145	153	anti-parallel
Strand 3	D	230	238	anti-parallel
Strand 4	D	203	207	anti-parallel
Strand 5	D	210	211	anti-parallel

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There are 9 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	109	112	first strand
Strand 2	D	115	119	anti-parallel
Strand 3	D	126	131	anti-parallel
Strand 4	D	135	142	anti-parallel
Strand 5	D	242	251	anti-parallel
Strand 6	D	188	196	anti-parallel
Strand 7	D	174	182	anti-parallel
Strand 8	D	161	169	anti-parallel
Strand 9	D	224	227	anti-parallel

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There are 6 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	288	291	first strand
Strand 2	D	667	671	anti-parallel
Strand 3	D	677	683	anti-parallel
Strand 4	D	716	723	parallel
Strand 5	D	691	697	anti-parallel
Strand 6	D	700	701	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	312	313	first strand
Strand 2	D	337	338	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	320	322	first strand
Strand 2	D	328	330	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	384	385	first strand
Strand 2	D	388	389	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	582	583	first strand
Strand 2	D	586	587	anti-parallel

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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	648	649	first strand
Strand 2	D	657	660	anti-parallel
Strand 3	D	706	708	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6F92

Analysis of interatomic Contacts of Structural Units in PDB entry:
6F92