Analysis of interatomic Contacts of Structural Units in PDB entry:
6F9O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6F9O entry

There is 1 chain in PDB entry 6F9O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1HIS 309
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 6F9O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 12Right-handed 310
Helix 2
AA2
A
58 63Right-handed 310
Helix 3
AA3
A
65 72Right-handed alpha
Helix 4
AA4
A
92 96Right-handed 310
Helix 5
AA5
A
97 113Right-handed alpha
Helix 6
AA6
A
123 136Right-handed alpha
Helix 7
AA7
A
158 171Right-handed alpha
Helix 8
AA8
A
175 183Right-handed alpha
Helix 9
AA9
A
189 198Right-handed alpha
Helix 10
AB1
A
202 205Right-handed 310
Helix 11
AB2
A
206 212Right-handed alpha
Helix 12
AB3
A
213 216Right-handed 310
Helix 13
AB4
A
224 236Right-handed alpha
Helix 14
AB5
A
255 264Right-handed alpha
Helix 15
AB6
A
265 268Right-handed 310
Helix 16
AB7
A
281 300Right-handed alpha
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There are 3 sheets in PDB entry 6F9O. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 4first strand
Strand 2
A
89 90anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 27first strand
Strand 2
A
33 41anti-parallel
Strand 3
A
75 79anti-parallel
Strand 4
A
48 52parallel
Strand 5
A
117 121parallel
Strand 6
A
140 145parallel
Strand 7
A
242 244parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
247 249first strand
Strand 2
A
275 279parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il