Analysis of interatomic Contacts of Structural Units in PDB entry:
6F9Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6F9Q entry

There are 4 chains in PDB entry 6F9Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 9PHE 265
B
 LYS 9PHE 265
C
 MET 7LEU 266
D
 LYS 9LEU 266
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 6F9Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 37Right-handed alpha
Helix 2
AA2
A
48 60Right-handed alpha
Helix 3
AA3
A
73 89Right-handed alpha
Helix 4
AA4
A
112 124Right-handed alpha
Helix 5
AA5
A
124 142Right-handed alpha
Helix 6
AA6
A
152 156Right-handed 310
Helix 7
AA7
A
162 184Right-handed alpha
Helix 8
AA8
A
200 205Right-handed alpha
Helix 9
AA9
A
210 218Right-handed alpha
Helix 10
AB1
A
219 222Right-handed 310
Helix 11
AB2
A
230 243Right-handed alpha
Helix 12
AB3
A
244 247Right-handed 310
Helix 13
AB4
B
24 37Right-handed alpha
Helix 14
AB5
B
48 60Right-handed alpha
Helix 15
AB6
B
73 89Right-handed alpha
Helix 16
AB7
B
112 124Right-handed alpha
Helix 17
AB8
B
124 142Right-handed alpha
Helix 18
AB9
B
152 156Right-handed 310
Helix 19
AC1
B
162 184Right-handed alpha
Helix 20
AC2
B
200 205Right-handed alpha
Helix 21
AC3
B
210 218Right-handed alpha
Helix 22
AC4
B
219 222Right-handed 310
Helix 23
AC5
B
230 243Right-handed alpha
Helix 24
AC6
B
244 247Right-handed 310
Helix 25
AC7
C
24 37Right-handed alpha
Helix 26
AC8
C
48 60Right-handed alpha
Helix 27
AC9
C
73 89Right-handed alpha
Helix 28
AD1
C
112 124Right-handed alpha
Helix 29
AD2
C
124 142Right-handed alpha
Helix 30
AD3
C
152 156Right-handed 310
Helix 31
AD4
C
162 184Right-handed alpha
Helix 32
AD5
C
200 205Right-handed alpha
Helix 33
AD6
C
210 218Right-handed alpha
Helix 34
AD7
C
219 222Right-handed 310
Helix 35
AD8
C
230 243Right-handed alpha
Helix 36
AD9
C
244 247Right-handed 310
Helix 37
AE1
D
24 37Right-handed alpha
Helix 38
AE2
D
48 60Right-handed alpha
Helix 39
AE3
D
73 89Right-handed alpha
Helix 40
AE4
D
112 124Right-handed alpha
Helix 41
AE5
D
124 142Right-handed alpha
Helix 42
AE6
D
152 156Right-handed 310
Helix 43
AE7
D
162 184Right-handed alpha
Helix 44
AE8
D
200 205Right-handed alpha
Helix 45
AE9
D
210 218Right-handed alpha
Helix 46
AF1
D
219 222Right-handed 310
Helix 47
AF2
D
230 243Right-handed alpha
Helix 48
AF3
D
244 247Right-handed 310
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There are 4 sheets in PDB entry 6F9Q. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 68first strand
Strand 2
A
41 46parallel
Strand 3
A
16 20parallel
Strand 4
A
93 96parallel
Strand 5
A
145 150parallel
Strand 6
A
188 195parallel
Strand 7
A
253 256parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
64 68first strand
Strand 2
B
41 46parallel
Strand 3
B
16 20parallel
Strand 4
B
93 96parallel
Strand 5
B
145 150parallel
Strand 6
B
188 195parallel
Strand 7
B
253 256parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
64 68first strand
Strand 2
C
41 46parallel
Strand 3
C
16 20parallel
Strand 4
C
93 96parallel
Strand 5
C
145 150parallel
Strand 6
C
188 195parallel
Strand 7
C
253 256parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
64 68first strand
Strand 2
D
41 46parallel
Strand 3
D
16 20parallel
Strand 4
D
93 96parallel
Strand 5
D
145 150parallel
Strand 6
D
188 195parallel
Strand 7
D
253 256parallel
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