Analysis of interatomic Contacts of Structural Units in PDB entry:
6FAS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FAS entry

There are 8 chains in PDB entry 6FAS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 287ALA 315
A
 ALA 317ALA 396
B
 MET 287ALA 315
B
 ALA 317ALA 396
C
 A 1 G 12
D
 C 1 T 12
E
 A 1 G 12
F
 C 1 T 12
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 6FAS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
300 305Right-handed alpha
Helix 2
AA2
A
313 321Right-handed alpha
Helix 3
AA3
A
362 369Right-handed alpha
Helix 4
AA4
B
300 305Right-handed alpha
Helix 5
AA5
B
313 321Right-handed alpha
Helix 6
AA6
B
362 369Right-handed alpha
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There are 2 sheets in PDB entry 6FAS. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
290 298first strand
Strand 2
A
376 383anti-parallel
Strand 3
A
387 393anti-parallel
Strand 4
A
330 336parallel
Strand 5
A
341 351anti-parallel
Strand 6
A
354 360anti-parallel
Strand 7
A
309 312anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
290 298first strand
Strand 2
B
376 383anti-parallel
Strand 3
B
387 393anti-parallel
Strand 4
B
330 336parallel
Strand 5
B
341 351anti-parallel
Strand 6
B
354 360anti-parallel
Strand 7
B
309 312anti-parallel
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