Analysis of interatomic Contacts of Structural Units in PDB entry:
6FBV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6FBV entry

There are 6 chains in PDB entry 6FBV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 4	ASN 226
B	LEU 3	ILE 232
C	SER 28	ILE 1145
D	ASP 3	ALA 1281
E	GLY 28	GLU 110
F	ALA 225	ASP 528

There are114 helices in PDB entry 6FBV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	30	45	Right-handed alpha
Helix 2	AA2	A	72	81	Right-handed alpha
Helix 3	AA3	A	108	110	Right-handed 310
Helix 4	AA4	A	148	153	Right-handed 310
Helix 5	AA5	A	203	221	Right-handed alpha
Helix 6	AA6	B	29	45	Right-handed alpha
Helix 7	AA7	B	72	82	Right-handed alpha
Helix 8	AA8	B	148	153	Right-handed alpha
Helix 9	AA9	B	203	226	Right-handed alpha
Helix 10	AB1	C	54	66	Right-handed alpha
Helix 11	AB2	C	67	78	Right-handed alpha
Helix 12	AB3	C	84	94	Right-handed alpha
Helix 13	AB4	C	118	126	Right-handed alpha
Helix 14	AB5	C	234	242	Right-handed alpha
Helix 15	AB6	C	244	252	Right-handed alpha
Helix 16	AB7	C	255	265	Right-handed alpha
Helix 17	AB8	C	269	282	Right-handed alpha
Helix 18	AB9	C	288	300	Right-handed alpha
Helix 19	AC1	C	309	321	Right-handed alpha
Helix 20	AC2	C	334	351	Right-handed alpha
Helix 21	AC3	C	380	407	Right-handed alpha
Helix 22	AC4	C	413	418	Right-handed alpha
Helix 23	AC5	C	420	434	Right-handed alpha
Helix 24	AC6	C	444	453	Right-handed alpha
Helix 25	AC7	C	532	537	Right-handed alpha
Helix 26	AC8	C	574	576	Right-handed 310
Helix 27	AC9	C	590	594	Right-handed 310
Helix 28	AD1	C	596	600	Right-handed 310
Helix 29	AD2	C	601	613	Right-handed alpha
Helix 30	AD3	C	630	639	Right-handed alpha
Helix 31	AD4	C	739	745	Right-handed alpha
Helix 32	AD5	C	779	783	Right-handed 310
Helix 33	AD6	C	815	826	Right-handed alpha
Helix 34	AD7	C	900	904	Right-handed 310
Helix 35	AD8	C	921	926	Right-handed alpha
Helix 36	AD9	C	928	943	Right-handed alpha
Helix 37	AE1	C	953	957	Right-handed 310
Helix 38	AE2	C	960	964	Right-handed 310
Helix 39	AE3	C	981	989	Right-handed alpha
Helix 40	AE4	C	1070	1080	Right-handed alpha
Helix 41	AE5	C	1081	1090	Right-handed alpha
Helix 42	AE6	C	1095	1109	Right-handed alpha
Helix 43	AE7	C	1118	1129	Right-handed alpha
Helix 44	AE8	D	16	24	Right-handed alpha
Helix 45	AE9	D	84	90	Right-handed 310
Helix 46	AF1	D	104	107	Right-handed 310
Helix 47	AF2	D	112	118	Right-handed alpha
Helix 48	AF3	D	121	130	Right-handed alpha
Helix 49	AF4	D	140	147	Right-handed alpha
Helix 50	AF5	D	147	188	Right-handed alpha
Helix 51	AF6	D	190	228	Right-handed alpha
Helix 52	AF7	D	237	248	Right-handed alpha
Helix 53	AF8	D	257	268	Right-handed alpha
Helix 54	AF9	D	269	283	Right-handed alpha
Helix 55	AG1	D	285	306	Right-handed alpha
Helix 56	AG2	D	308	311	Right-handed 310
Helix 57	AG3	D	339	361	Right-handed alpha
Helix 58	AG4	D	363	383	Right-handed alpha
Helix 59	AG5	D	402	406	Right-handed 310
Helix 60	AG6	D	414	419	Right-handed alpha
Helix 61	AG7	D	445	452	Right-handed alpha
Helix 62	AG8	D	452	463	Right-handed alpha
Helix 63	AG9	D	468	478	Right-handed alpha
Helix 64	AH1	D	482	491	Right-handed alpha
Helix 65	AH2	D	505	507	Right-handed 310
Helix 66	AH3	D	525	527	Right-handed 310
Helix 67	AH4	D	528	533	Right-handed alpha
Helix 68	AH5	D	548	558	Right-handed alpha
Helix 69	AH6	D	560	564	Right-handed 310
Helix 70	AH7	D	580	588	Right-handed alpha
Helix 71	AH8	D	614	625	Right-handed alpha
Helix 72	AH9	D	643	651	Right-handed alpha
Helix 73	AI1	D	668	675	Right-handed alpha
Helix 74	AI2	D	689	702	Right-handed alpha
Helix 75	AI3	D	705	726	Right-handed alpha
Helix 76	AI4	D	741	763	Right-handed alpha
Helix 77	AI5	D	766	793	Right-handed alpha
Helix 78	AI6	D	797	805	Right-handed alpha
Helix 79	AI7	D	810	819	Right-handed alpha
Helix 80	AI8	D	845	881	Right-handed alpha
Helix 81	AI9	D	915	920	Right-handed alpha
Helix 82	AJ1	D	945	956	Right-handed alpha
Helix 83	AJ2	D	964	968	Right-handed 310
Helix 84	AJ3	D	975	979	Right-handed 310
Helix 85	AJ4	D	994	1005	Right-handed alpha
Helix 86	AJ5	D	1006	1009	Right-handed 310
Helix 87	AJ6	D	1027	1037	Right-handed alpha
Helix 88	AJ7	D	1117	1146	Right-handed alpha
Helix 89	AJ8	D	1150	1162	Right-handed alpha
Helix 90	AJ9	D	1183	1195	Right-handed alpha
Helix 91	AK1	D	1219	1227	Right-handed alpha
Helix 92	AK2	D	1228	1240	Right-handed alpha
Helix 93	AK3	D	1247	1255	Right-handed alpha
Helix 94	AK4	D	1264	1269	Right-handed alpha
Helix 95	AK5	E	33	37	Right-handed 310
Helix 96	AK6	E	39	47	Right-handed alpha
Helix 97	AK7	E	51	71	Right-handed alpha
Helix 98	AK8	E	90	100	Right-handed alpha
Helix 99	AK9	F	226	238	Right-handed alpha
Helix 100	AL1	F	242	270	Right-handed alpha
Helix 101	AL2	F	274	308	Right-handed alpha
Helix 102	AL3	F	316	334	Right-handed alpha
Helix 103	AL4	F	342	363	Right-handed alpha
Helix 104	AL5	F	369	391	Right-handed alpha
Helix 105	AL6	F	397	402	Right-handed alpha
Helix 106	AL7	F	407	418	Right-handed alpha
Helix 107	AL8	F	435	439	Right-handed 310
Helix 108	AL9	F	447	464	Right-handed alpha
Helix 109	AM1	F	468	476	Right-handed alpha
Helix 110	AM2	F	488	495	Right-handed alpha
Helix 111	AM3	F	501	505	Right-handed 310
Helix 112	AM4	F	512	514	Right-handed 310
Helix 113	AM5	F	515	520	Right-handed alpha
Helix 114	AM6	F	523	528	Right-handed alpha

There are 41 sheets in PDB entry 6FBV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	9	13	first strand
Strand 2	A	18	26	anti-parallel
Strand 3	A	190	198	anti-parallel
Strand 4	A	171	180	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	93	100	first strand
Strand 2	A	133	143	anti-parallel
Strand 3	A	48	56	anti-parallel
Strand 4	A	162	163	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	85	87	first strand
Strand 2	A	116	118	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	103	106	first strand
Strand 2	A	124	128	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	146	147	first strand
Strand 2	A	166	167	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	9	14	first strand
Strand 2	B	18	26	anti-parallel
Strand 3	B	189	198	anti-parallel
Strand 4	B	171	181	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	93	100	first strand
Strand 2	B	133	143	anti-parallel
Strand 3	B	48	56	anti-parallel
Strand 4	B	162	163	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	85	87	first strand
Strand 2	B	116	118	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	103	106	first strand
Strand 2	B	124	128	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	146	147	first strand
Strand 2	B	166	167	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	39	40	first strand
Strand 2	C	972	973	parallel
Strand 3	C	626	627	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	96	97	first strand
Strand 2	C	103	112	anti-parallel
Strand 3	C	130	141	anti-parallel
Strand 4	C	148	158	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	166	168	first strand
Strand 2	C	171	175	anti-parallel
Strand 3	C	437	439	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	376	379	first strand
Strand 2	C	177	181	anti-parallel
Strand 3	C	454	456	parallel
Strand 4	C	497	499	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	184	187	first strand
Strand 2	C	201	205	anti-parallel
Strand 3	C	212	215	anti-parallel
Strand 4	C	223	226	anti-parallel
Strand 5	C	232	233	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	354	355	first strand
Strand 2	C	363	364	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	505	506	first strand
Strand 2	C	512	519	anti-parallel
Strand 3	C	524	531	anti-parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	505	506	first strand
Strand 2	C	512	519	anti-parallel
Strand 3	C	578	580	anti-parallel
Strand 4	C	540	542	parallel
Strand 5	C	558	563	anti-parallel
Strand 6	C	567	572	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	667	671	first strand
Strand 2	C	657	662	anti-parallel
Strand 3	C	648	653	anti-parallel
Strand 4	C	695	696	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	674	677	first strand
Strand 2	C	683	685	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	687	688	first strand
Strand 2	C	703	704	anti-parallel

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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	885	886	first strand
Strand 2	C	1023	1032	anti-parallel
Strand 3	C	717	723	anti-parallel
Strand 4	C	915	917	parallel
Strand 5	C	735	738	anti-parallel
Strand 6	C	895	899	parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	885	886	first strand
Strand 2	C	1023	1032	anti-parallel
Strand 3	C	1007	1008	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	765	766	first strand
Strand 2	C	749	762	anti-parallel
Strand 3	C	865	877	anti-parallel
Strand 4	C	846	853	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	768	769	first strand
Strand 2	C	805	807	anti-parallel
Strand 3	C	833	834	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	801	803	first strand
Strand 2	C	837	838	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	906	907	first strand
Strand 2	C	1010	1011	anti-parallel

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There are 8 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1042	1044	first strand
Strand 2	D	425	432	anti-parallel
Strand 3	D	540	544	anti-parallel
Strand 4	D	496	499	anti-parallel
Strand 5	D	509	517	anti-parallel
Strand 6	D	440	444	parallel
Strand 7	D	522	524	anti-parallel
Strand 8	D	425	432	parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1067	1068	first strand
Strand 2	D	420	421	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1133	1138	first strand
Strand 2	D	9	14	anti-parallel
Strand 3	D	1242	1244	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	93	102	first strand
Strand 2	D	313	319	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	134	135	first strand
Strand 2	D	234	235	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	138	139	first strand
Strand 2	D	252	253	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	327	329	first strand
Strand 2	D	335	337	anti-parallel
Strand 3	F	421	422	parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	611	612	first strand
Strand 2	D	632	635	parallel
Strand 3	D	666	667	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	897	900	first strand
Strand 2	D	959	963	anti-parallel
Strand 3	D	924	925	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	902	903	first strand
Strand 2	D	911	912	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	929	930	first strand
Strand 2	D	936	938	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1051	1057	first strand
Strand 2	D	1061	1068	anti-parallel
Strand 3	D	1075	1080	anti-parallel

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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1180	1182	first strand
Strand 2	D	1164	1169	anti-parallel
Strand 3	D	1202	1206	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1271	1274	first strand
Strand 2	E	104	107	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6FBV

Analysis of interatomic Contacts of Structural Units in PDB entry:
6FBV