Analysis of interatomic Contacts of Structural Units in PDB entry:
6FCT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FCT entry

There is 1 chain in PDB entry 6FCT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 21SER 229
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 10 helices in PDB entry 6FCT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 44Right-handed alpha
Helix 2
AA2
A
51 55Right-handed 310
Helix 3
AA3
A
73 75Right-handed 310
Helix 4
AA4
A
76 83Right-handed alpha
Helix 5
AA5
A
93 100Right-handed alpha
Helix 6
AA6
A
138 149Right-handed alpha
Helix 7
AA7
A
161 169Right-handed 310
Helix 8
AA8
A
181 187Right-handed alpha
Helix 9
AA9
A
206 212Right-handed alpha
Helix 10
AB1
A
212 228Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 6FCT. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 61first strand
Strand 2
A
67 72anti-parallel
Strand 3
A
24 29parallel
Strand 4
A
88 92parallel
Strand 5
A
200 205anti-parallel
Strand 6
A
104 109anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
154 157first strand
Strand 2
A
133 136parallel
Strand 3
A
173 178parallel
Strand 4
A
115 122anti-parallel
Strand 5
A
189 198anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il