Analysis of interatomic Contacts of Structural Units in PDB entry:
6FCV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FCV entry

There are 2 chains in PDB entry 6FCV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1HIS 1140
B
 MET 1LEU 365
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 6FCV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
366 370Right-handed 310
Helix 2
AA2
A
381 384Right-handed 310
Helix 3
AA3
A
986 991Right-handed 310
Helix 4
AA4
A
1044 1062Right-handed alpha
Helix 5
AA5
A
1069 1074Right-handed alpha
Helix 6
AA6
A
1091 1096Right-handed alpha
Helix 7
AA7
A
1097 1100Right-handed 310
Helix 8
AA8
A
1102 1110Right-handed alpha
Helix 9
AA9
A
1125 1138Right-handed alpha
Helix 10
AB1
B
2 11Right-handed alpha
Helix 11
AB2
B
14 29Right-handed alpha
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There are 35 sheets in PDB entry 6FCV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1004 1009first strand
Strand 2
A
1025 1032anti-parallel
Strand 3
A
1037 1043anti-parallel
Strand 4
A
3 10anti-parallel
Strand 5
A
1088 1090parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 21first strand
Strand 2
A
30 35anti-parallel
Strand 3
A
38 44anti-parallel
Strand 4
A
49 56anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 67first strand
Strand 2
A
76 81anti-parallel
Strand 3
A
85 90anti-parallel
Strand 4
A
101 107anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
93 94first strand
Strand 2
A
97 98anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 124first strand
Strand 2
A
130 136anti-parallel
Strand 3
A
139 144anti-parallel
Strand 4
A
155 158anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
164 169first strand
Strand 2
A
177 184anti-parallel
Strand 3
A
187 196anti-parallel
Strand 4
A
201 202anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
164 169first strand
Strand 2
A
177 184anti-parallel
Strand 3
A
187 196anti-parallel
Strand 4
A
210 211anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
218 220first strand
Strand 2
A
229 232anti-parallel
Strand 3
A
237 240anti-parallel
Strand 4
A
245 248anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 263first strand
Strand 2
A
270 274anti-parallel
Strand 3
A
279 285anti-parallel
Strand 4
A
300 307anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
313 316first strand
Strand 2
A
321 325anti-parallel
Strand 3
A
331 336anti-parallel
Strand 4
A
347 353anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
362 365first strand
Strand 2
A
374 379anti-parallel
Strand 3
A
386 392anti-parallel
Strand 4
A
710 716anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
409 413first strand
Strand 2
A
424 428anti-parallel
Strand 3
A
433 436anti-parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
457 463first strand
Strand 2
A
467 472anti-parallel
Strand 3
A
479 480anti-parallel
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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
507 512first strand
Strand 2
A
515 522anti-parallel
Strand 3
A
525 527anti-parallel
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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
507 512first strand
Strand 2
A
515 522anti-parallel
Strand 3
A
531 532anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
538 542first strand
Strand 2
A
555 560anti-parallel
Strand 3
A
566 570anti-parallel
Strand 4
A
576 579anti-parallel
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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
588 596first strand
Strand 2
A
599 606anti-parallel
Strand 3
A
611 616anti-parallel
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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
640 643first strand
Strand 2
A
646 651anti-parallel
Strand 3
A
657 662anti-parallel
Strand 4
A
665 670anti-parallel
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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
678 682first strand
Strand 2
A
690 694anti-parallel
Strand 3
A
699 702anti-parallel
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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
720 727first strand
Strand 2
A
732 742anti-parallel
Strand 3
A
750 751anti-parallel
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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
720 727first strand
Strand 2
A
732 742anti-parallel
Strand 3
A
785 795anti-parallel
Strand 4
A
801 806anti-parallel
Strand 5
A
762 765parallel
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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
811 820first strand
Strand 2
A
827 835anti-parallel
Strand 3
A
846 854anti-parallel
Strand 4
A
857 862anti-parallel
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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
811 820first strand
Strand 2
A
827 835anti-parallel
Strand 3
A
846 854anti-parallel
Strand 4
A
865 866anti-parallel
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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
870 876first strand
Strand 2
A
879 884anti-parallel
Strand 3
A
887 894anti-parallel
Strand 4
A
898 905anti-parallel
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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
911 917first strand
Strand 2
A
920 925anti-parallel
Strand 3
A
930 936anti-parallel
Strand 4
A
941 947anti-parallel
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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
954 961first strand
Strand 2
A
964 969anti-parallel
Strand 3
A
973 978anti-parallel
Strand 4
A
996 999anti-parallel
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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1076 1077first strand
Strand 2
A
1082 1083anti-parallel
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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 32first strand
Strand 2
B
358 363anti-parallel
Strand 3
B
348 353anti-parallel
Strand 4
B
337 343anti-parallel
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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
36 38first strand
Strand 2
B
82 84parallel
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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 51first strand
Strand 2
B
58 63anti-parallel
Strand 3
B
68 72anti-parallel
Strand 4
B
86 90anti-parallel
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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
102 107first strand
Strand 2
B
114 119anti-parallel
Strand 3
B
123 128anti-parallel
Strand 4
B
134 139anti-parallel
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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
144 148first strand
Strand 2
B
158 163anti-parallel
Strand 3
B
168 172anti-parallel
Strand 4
B
180 182anti-parallel
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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
189 194first strand
Strand 2
B
201 206anti-parallel
Strand 3
B
211 215anti-parallel
Strand 4
B
224 225anti-parallel
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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
248 253first strand
Strand 2
B
259 264anti-parallel
Strand 3
B
269 273anti-parallel
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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
298 299first strand
Strand 2
B
307 312anti-parallel
Strand 3
B
315 320anti-parallel
Strand 4
B
328 331anti-parallel
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