Analysis of interatomic Contacts of Structural Units in PDB entry:
6FDD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FDD entry

There are 6 chains in PDB entry 6FDD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 424ARG 499
B
 ARG 424ARG 499
C
 THR 423ARG 499
D
 ARG 424ARG 499
E
 ARG 424ARG 499
F
 ALA 425ARG 499
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 6FDD. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
424 435Right-handed alpha
Helix 2
AA2
A
436 452Right-handed alpha
Helix 3
AA3
A
456 468Right-handed alpha
Helix 4
AA4
A
470 475Right-handed alpha
Helix 5
AA5
A
475 482Right-handed alpha
Helix 6
AA6
A
483 484Right-handed 310
Helix 7
AA7
A
485 487Right-handed 310
Helix 8
AA8
A
488 496Right-handed alpha
Helix 9
AA9
B
425 433Right-handed alpha
Helix 10
AB1
B
436 452Right-handed alpha
Helix 11
AB2
B
456 468Right-handed alpha
Helix 12
AB3
B
470 475Right-handed alpha
Helix 13
AB4
B
475 482Right-handed alpha
Helix 14
AB5
B
483 484Right-handed 310
Helix 15
AB6
B
485 487Right-handed 310
Helix 16
AB7
B
488 496Right-handed alpha
Helix 17
AB8
C
424 435Right-handed alpha
Helix 18
AB9
C
436 452Right-handed alpha
Helix 19
AC1
C
456 468Right-handed alpha
Helix 20
AC2
C
470 475Right-handed alpha
Helix 21
AC3
C
475 482Right-handed alpha
Helix 22
AC4
C
483 484Right-handed 310
Helix 23
AC5
C
485 487Right-handed 310
Helix 24
AC6
C
488 496Right-handed alpha
Helix 25
AC7
D
425 435Right-handed alpha
Helix 26
AC8
D
436 452Right-handed alpha
Helix 27
AC9
D
456 468Right-handed alpha
Helix 28
AD1
D
470 475Right-handed alpha
Helix 29
AD2
D
475 482Right-handed alpha
Helix 30
AD3
D
483 484Right-handed 310
Helix 31
AD4
D
485 487Right-handed 310
Helix 32
AD5
D
488 496Right-handed alpha
Helix 33
AD6
E
425 435Right-handed alpha
Helix 34
AD7
E
436 452Right-handed alpha
Helix 35
AD8
E
456 468Right-handed alpha
Helix 36
AD9
E
470 475Right-handed alpha
Helix 37
AE1
E
475 482Right-handed alpha
Helix 38
AE2
E
483 484Right-handed 310
Helix 39
AE3
E
485 487Right-handed 310
Helix 40
AE4
E
488 496Right-handed alpha
Helix 41
AE5
F
426 432Right-handed alpha
Helix 42
AE6
F
436 452Right-handed alpha
Helix 43
AE7
F
456 468Right-handed alpha
Helix 44
AE8
F
470 475Right-handed alpha
Helix 45
AE9
F
475 482Right-handed alpha
Helix 46
AF1
F
483 484Right-handed 310
Helix 47
AF2
F
485 487Right-handed 310
Helix 48
AF3
F
488 496Right-handed alpha
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There are no sheets in PDB entry 6FDD
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