Analysis of interatomic Contacts of Structural Units in PDB entry:
6FER

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6FER entry

There are 5 chains in PDB entry 6FER (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 600	GLN 898
B	VAL 600	GLN 898
C	VAL 600	GLN 898
D	VAL 600	GLN 898
E	VAL 600	ASP 757

There are164 helices in PDB entry 6FER. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	606	610	Right-handed 310
Helix 2	AA2	A	662	678	Right-handed alpha
Helix 3	AA3	A	708	715	Right-handed alpha
Helix 4	AA4	A	730	751	Right-handed alpha
Helix 5	AA5	A	759	761	Right-handed 310
Helix 6	AA6	A	767	769	Right-handed 310
Helix 7	AA7	A	780	787	Right-handed 310
Helix 8	AA8	A	802	807	Right-handed alpha
Helix 9	AA9	A	812	830	Right-handed alpha
Helix 10	AB1	A	840	854	Right-handed alpha
Helix 11	AB2	A	868	879	Right-handed alpha
Helix 12	AB3	A	882	886	Right-handed 310
Helix 13	AB4	A	888	897	Right-handed alpha
Helix 14	AB5	B	606	610	Right-handed 310
Helix 15	AB6	B	662	678	Right-handed alpha
Helix 16	AB7	B	708	716	Right-handed alpha
Helix 17	AB8	B	730	751	Right-handed alpha
Helix 18	AB9	B	759	761	Right-handed 310
Helix 19	AC1	B	767	769	Right-handed 310
Helix 20	AC2	B	780	787	Right-handed 310
Helix 21	AC3	B	797	801	Right-handed 310
Helix 22	AC4	B	802	807	Right-handed alpha
Helix 23	AC5	B	812	829	Right-handed alpha
Helix 24	AC6	B	840	854	Right-handed alpha
Helix 25	AC7	B	868	879	Right-handed alpha
Helix 26	AC8	B	882	886	Right-handed 310
Helix 27	AC9	B	888	897	Right-handed alpha
Helix 28	AD1	C	606	608	Right-handed 310
Helix 29	AD2	C	662	679	Right-handed alpha
Helix 30	AD3	C	708	715	Right-handed alpha
Helix 31	AD4	C	730	751	Right-handed alpha
Helix 32	AD5	C	759	761	Right-handed 310
Helix 33	AD6	C	767	769	Right-handed 310
Helix 34	AD7	C	780	787	Right-handed 310
Helix 35	AD8	C	797	801	Right-handed 310
Helix 36	AD9	C	802	807	Right-handed alpha
Helix 37	AE1	C	812	830	Right-handed alpha
Helix 38	AE2	C	840	854	Right-handed alpha
Helix 39	AE3	C	868	878	Right-handed alpha
Helix 40	AE4	C	882	886	Right-handed 310
Helix 41	AE5	C	888	898	Right-handed alpha
Helix 42	AE6	D	606	610	Right-handed 310
Helix 43	AE7	D	662	678	Right-handed alpha
Helix 44	AE8	D	708	715	Right-handed alpha
Helix 45	AE9	D	730	751	Right-handed alpha
Helix 46	AF1	D	759	761	Right-handed 310
Helix 47	AF2	D	767	769	Right-handed 310
Helix 48	AF3	D	783	787	Right-handed 310
Helix 49	AF4	D	797	801	Right-handed 310
Helix 50	AF5	D	802	807	Right-handed alpha
Helix 51	AF6	D	812	829	Right-handed alpha
Helix 52	AF7	D	840	854	Right-handed alpha
Helix 53	AF8	D	868	879	Right-handed alpha
Helix 54	AF9	D	888	898	Right-handed alpha
Helix 55	AG1	E	606	610	Right-handed 310
Helix 56	AG2	E	662	677	Right-handed alpha
Helix 57	AG3	E	708	715	Right-handed alpha
Helix 58	AG4	E	730	751	Right-handed alpha
Helix 59	AG5	E	759	761	Right-handed 310
Helix 60	AG6	E	767	769	Right-handed 310
Helix 61	AG7	E	780	787	Right-handed 310
Helix 62	AG8	E	797	801	Right-handed 310
Helix 63	AG9	E	802	809	Right-handed alpha
Helix 64	AH1	E	812	830	Right-handed alpha
Helix 65	AH2	E	840	854	Right-handed alpha
Helix 66	AH3	E	868	879	Right-handed alpha
Helix 67	AH4	E	888	898	Right-handed alpha
Helix 68	AH5	F	606	610	Right-handed 310
Helix 69	AH6	F	662	677	Right-handed alpha
Helix 70	AH7	F	708	716	Right-handed alpha
Helix 71	AH8	F	730	751	Right-handed alpha
Helix 72	AH9	F	759	761	Right-handed 310
Helix 73	AI1	F	767	769	Right-handed 310
Helix 74	AI2	F	783	787	Right-handed 310
Helix 75	AI3	F	797	801	Right-handed 310
Helix 76	AI4	F	802	808	Right-handed alpha
Helix 77	AI5	F	812	829	Right-handed alpha
Helix 78	AI6	F	840	854	Right-handed alpha
Helix 79	AI7	F	868	879	Right-handed alpha
Helix 80	AI8	F	882	886	Right-handed 310
Helix 81	AI9	F	888	896	Right-handed alpha
Helix 82	AJ1	G	662	677	Right-handed alpha
Helix 83	AJ2	G	708	715	Right-handed alpha
Helix 84	AJ3	G	730	751	Right-handed alpha
Helix 85	AJ4	G	759	761	Right-handed 310
Helix 86	AJ5	G	767	769	Right-handed 310
Helix 87	AJ6	G	780	787	Right-handed 310
Helix 88	AJ7	G	797	801	Right-handed 310
Helix 89	AJ8	G	802	807	Right-handed alpha
Helix 90	AJ9	G	812	830	Right-handed alpha
Helix 91	AK1	G	840	854	Right-handed alpha
Helix 92	AK2	G	868	879	Right-handed alpha
Helix 93	AK3	G	882	886	Right-handed 310
Helix 94	AK4	G	888	897	Right-handed alpha
Helix 95	AK5	H	606	610	Right-handed 310
Helix 96	AK6	H	662	679	Right-handed alpha
Helix 97	AK7	H	708	716	Right-handed alpha
Helix 98	AK8	H	730	751	Right-handed alpha
Helix 99	AK9	H	759	761	Right-handed 310
Helix 100	AL1	H	767	769	Right-handed 310
Helix 101	AL2	H	780	787	Right-handed 310
Helix 102	AL3	H	797	801	Right-handed 310
Helix 103	AL4	H	802	809	Right-handed alpha
Helix 104	AL5	H	812	829	Right-handed alpha
Helix 105	AL6	H	840	854	Right-handed alpha
Helix 106	AL7	H	868	879	Right-handed alpha
Helix 107	AL8	H	882	886	Right-handed 310
Helix 108	AL9	H	888	898	Right-handed alpha
Helix 109	AM1	I	606	610	Right-handed 310
Helix 110	AM2	I	663	679	Right-handed alpha
Helix 111	AM3	I	708	716	Right-handed alpha
Helix 112	AM4	I	730	751	Right-handed alpha
Helix 113	AM5	I	759	761	Right-handed 310
Helix 114	AM6	I	767	769	Right-handed 310
Helix 115	AM7	I	783	787	Right-handed 310
Helix 116	AM8	I	797	801	Right-handed 310
Helix 117	AM9	I	802	809	Right-handed alpha
Helix 118	AN1	I	812	829	Right-handed alpha
Helix 119	AN2	I	840	854	Right-handed alpha
Helix 120	AN3	I	868	879	Right-handed alpha
Helix 121	AN4	I	882	886	Right-handed 310
Helix 122	AN5	I	888	896	Right-handed alpha
Helix 123	AN6	J	606	610	Right-handed 310
Helix 124	AN7	J	662	677	Right-handed alpha
Helix 125	AN8	J	708	716	Right-handed alpha
Helix 126	AN9	J	730	751	Right-handed alpha
Helix 127	AO1	J	759	761	Right-handed 310
Helix 128	AO2	J	767	769	Right-handed 310
Helix 129	AO3	J	783	787	Right-handed 310
Helix 130	AO4	J	797	801	Right-handed 310
Helix 131	AO5	J	802	809	Right-handed alpha
Helix 132	AO6	J	812	829	Right-handed alpha
Helix 133	AO7	J	840	854	Right-handed alpha
Helix 134	AO8	J	868	879	Right-handed alpha
Helix 135	AO9	J	882	886	Right-handed 310
Helix 136	AP1	J	888	898	Right-handed alpha
Helix 137	AP2	K	606	610	Right-handed 310
Helix 138	AP3	K	663	679	Right-handed alpha
Helix 139	AP4	K	708	716	Right-handed alpha
Helix 140	AP5	K	730	751	Right-handed alpha
Helix 141	AP6	K	759	761	Right-handed 310
Helix 142	AP7	K	767	769	Right-handed 310
Helix 143	AP8	K	780	787	Right-handed 310
Helix 144	AP9	K	797	801	Right-handed 310
Helix 145	AQ1	K	802	808	Right-handed alpha
Helix 146	AQ2	K	812	829	Right-handed alpha
Helix 147	AQ3	K	840	854	Right-handed alpha
Helix 148	AQ4	K	868	879	Right-handed alpha
Helix 149	AQ5	K	882	886	Right-handed 310
Helix 150	AQ6	K	888	898	Right-handed alpha
Helix 151	AQ7	L	606	610	Right-handed 310
Helix 152	AQ8	L	662	679	Right-handed alpha
Helix 153	AQ9	L	708	715	Right-handed alpha
Helix 154	AR1	L	730	751	Right-handed alpha
Helix 155	AR2	L	759	761	Right-handed 310
Helix 156	AR3	L	767	769	Right-handed 310
Helix 157	AR4	L	780	787	Right-handed 310
Helix 158	AR5	L	797	801	Right-handed 310
Helix 159	AR6	L	802	807	Right-handed alpha
Helix 160	AR7	L	812	829	Right-handed alpha
Helix 161	AR8	L	840	854	Right-handed alpha
Helix 162	AR9	L	868	878	Right-handed alpha
Helix 163	AS1	L	882	886	Right-handed 310
Helix 164	AS2	L	888	897	Right-handed alpha

There are 36 sheets in PDB entry 6FER. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	612	618	first strand
Strand 2	A	623	628	anti-parallel
Strand 3	A	651	656	anti-parallel
Strand 4	A	698	702	anti-parallel
Strand 5	A	689	691	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	763	765	first strand
Strand 2	A	771	773	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	788	789	first strand
Strand 2	A	795	796	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	611	619	first strand
Strand 2	B	622	628	anti-parallel
Strand 3	B	652	656	anti-parallel
Strand 4	B	698	702	anti-parallel
Strand 5	B	687	691	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	763	765	first strand
Strand 2	B	771	773	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	788	789	first strand
Strand 2	B	795	796	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	610	619	first strand
Strand 2	C	622	629	anti-parallel
Strand 3	C	651	656	anti-parallel
Strand 4	C	698	702	anti-parallel
Strand 5	C	687	691	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	763	765	first strand
Strand 2	C	771	773	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	788	789	first strand
Strand 2	C	795	796	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	611	618	first strand
Strand 2	D	622	628	anti-parallel
Strand 3	D	651	657	anti-parallel
Strand 4	D	698	702	anti-parallel
Strand 5	D	689	691	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	763	765	first strand
Strand 2	D	771	773	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	788	789	first strand
Strand 2	D	795	796	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	612	618	first strand
Strand 2	E	622	628	anti-parallel
Strand 3	E	651	657	anti-parallel
Strand 4	E	698	702	anti-parallel
Strand 5	E	687	691	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	763	765	first strand
Strand 2	E	771	773	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	788	789	first strand
Strand 2	E	795	796	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	612	619	first strand
Strand 2	F	622	629	anti-parallel
Strand 3	F	650	656	anti-parallel
Strand 4	F	698	702	anti-parallel
Strand 5	F	687	691	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	763	765	first strand
Strand 2	F	771	773	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	788	789	first strand
Strand 2	F	795	796	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	610	618	first strand
Strand 2	G	622	629	anti-parallel
Strand 3	G	651	657	anti-parallel
Strand 4	G	698	702	anti-parallel
Strand 5	G	689	691	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	763	765	first strand
Strand 2	G	771	773	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	788	789	first strand
Strand 2	G	795	796	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	612	619	first strand
Strand 2	H	622	628	anti-parallel
Strand 3	H	651	656	anti-parallel
Strand 4	H	698	702	anti-parallel
Strand 5	H	689	691	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	763	765	first strand
Strand 2	H	771	773	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	788	789	first strand
Strand 2	H	795	796	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	611	619	first strand
Strand 2	I	622	628	anti-parallel
Strand 3	I	652	657	anti-parallel
Strand 4	I	697	702	anti-parallel
Strand 5	I	687	691	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	763	765	first strand
Strand 2	I	771	773	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	788	789	first strand
Strand 2	I	795	796	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	611	618	first strand
Strand 2	J	623	628	anti-parallel
Strand 3	J	652	656	anti-parallel
Strand 4	J	698	702	anti-parallel
Strand 5	J	689	691	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	763	765	first strand
Strand 2	J	771	773	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	788	789	first strand
Strand 2	J	795	796	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	611	619	first strand
Strand 2	K	622	628	anti-parallel
Strand 3	K	652	656	anti-parallel
Strand 4	K	698	702	anti-parallel
Strand 5	K	687	691	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	763	765	first strand
Strand 2	K	771	773	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	788	789	first strand
Strand 2	K	795	796	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	612	619	first strand
Strand 2	L	622	627	anti-parallel
Strand 3	L	652	656	anti-parallel
Strand 4	L	698	702	anti-parallel
Strand 5	L	689	691	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	763	765	first strand
Strand 2	L	771	773	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	788	789	first strand
Strand 2	L	795	796	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6FER

Analysis of interatomic Contacts of Structural Units in PDB entry:
6FER