Analysis of interatomic Contacts of Structural Units in PDB entry:
6FFI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FFI entry

There are 2 chains in PDB entry 6FFI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 568PHE 633
A
 LEU 635ASN 992
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 6FFI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
568 575Right-handed alpha
Helix 2
AA2
A
578 604Right-handed alpha
Helix 3
AA3
A
607 612Right-handed alpha
Helix 4
AA4
A
614 631Right-handed alpha
Helix 5
AA5
A
631 636Right-handed alpha
Helix 6
AA6
A
640 688Right-handed alpha
Helix 7
AA7
A
715 728Right-handed alpha
Helix 8
AA8
A
736 757Right-handed alpha
Helix 9
AA9
A
761 768Right-handed alpha
Helix 10
AB1
A
769 789Right-handed alpha
Helix 11
AB2
A
791 800Right-handed alpha
Helix 12
AB3
A
802 811Right-handed alpha
Helix 13
AB4
A
813 819Right-handed alpha
Helix 14
AB5
A
819 833Right-handed alpha
Helix 15
AB6
A
850 875Right-handed alpha
Helix 16
AB7
A
896 921Right-handed alpha
Helix 17
AB8
A
925 954Right-handed alpha
Helix 18
AB9
A
957 988Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6FFI.

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
691 696first strand
Strand 2
A
702 705anti-parallel
Strand 3
A
708 709anti-parallel
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