Analysis of interatomic Contacts of Structural Units in PDB entry:
6FFL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FFL entry

There is 1 chain in PDB entry 6FFL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 3ASP 385
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 6FFL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 30Right-handed alpha
Helix 2
AA2
A
41 55Right-handed alpha
Helix 3
AA3
A
68 75Right-handed alpha
Helix 4
AA4
A
81 86Right-handed alpha
Helix 5
AA5
A
86 91Right-handed alpha
Helix 6
AA6
A
92 93Right-handed 310
Helix 7
AA7
A
94 98Right-handed 310
Helix 8
AA8
A
131 143Right-handed alpha
Helix 9
AA9
A
163 168Right-handed alpha
Helix 10
AB1
A
169 174Right-handed alpha
Helix 11
AB2
A
190 206Right-handed alpha
Helix 12
AB3
A
215 225Right-handed alpha
Helix 13
AB4
A
237 244Right-handed alpha
Helix 14
AB5
A
280 295Right-handed alpha
Helix 15
AB6
A
296 308Right-handed alpha
Helix 16
AB7
A
314 318Right-handed 310
Helix 17
AB8
A
319 324Right-handed alpha
Helix 18
AB9
A
327 337Right-handed alpha
Helix 19
AC1
A
345 363Right-handed alpha
Helix 20
AC2
A
367 385Right-handed alpha
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There are 5 sheets in PDB entry 6FFL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 39first strand
Strand 2
A
4 9parallel
Strand 3
A
61 65parallel
Strand 4
A
270 274anti-parallel
Strand 5
A
108 109anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 101first strand
Strand 2
A
104 105anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 112first strand
Strand 2
A
310 311anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 158first strand
Strand 2
A
228 234parallel
Strand 3
A
116 121anti-parallel
Strand 4
A
248 251anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
266 267first strand
Strand 2
A
339 340parallel
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