Analysis of interatomic Contacts of Structural Units in PDB entry:
6FG8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FG8 entry

There are 2 chains in PDB entry 6FG8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 25GLY 212
B
 GLU 25ALA 213
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 6FG8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 39Right-handed alpha
Helix 2
AA2
A
56 60Right-handed 310
Helix 3
AA3
A
86 92Right-handed 310
Helix 4
AA4
A
110 116Right-handed 310
Helix 5
AA5
A
134 140Right-handed 310
Helix 6
AA6
A
158 164Right-handed 310
Helix 7
AA7
A
184 190Right-handed 310
Helix 8
AA8
A
191 195Right-handed 310
Helix 9
AA9
B
26 38Right-handed alpha
Helix 10
AB1
B
52 56Right-handed 310
Helix 11
AB2
B
89 95Right-handed 310
Helix 12
AB3
B
115 120Right-handed alpha
Helix 13
AB4
B
138 144Right-handed 310
Helix 14
AB5
B
162 168Right-handed 310
Helix 15
AB6
B
186 190Right-handed 310
Helix 16
AB7
B
193 197Right-handed 310
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There are 6 sheets in PDB entry 6FG8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 41first strand
Strand 2
A
82 83anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 65first strand
Strand 2
A
71 75anti-parallel
Strand 3
A
97 99parallel
Strand 4
A
121 123parallel
Strand 5
A
145 147parallel
Strand 6
A
169 171parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 108first strand
Strand 2
A
128 131parallel
Strand 3
A
152 155parallel
Strand 4
A
176 180parallel
Strand 5
A
200 202parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
64 66first strand
Strand 2
B
74 78anti-parallel
Strand 3
B
100 102parallel
Strand 4
B
125 127parallel
Strand 5
B
149 151parallel
Strand 6
B
173 175parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
85 86first strand
Strand 2
B
107 108parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
158 160first strand
Strand 2
B
180 182parallel
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